DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acox-1.2

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_493262.2 Gene:acox-1.2 / 173163 WormBaseID:WBGene00008565 Length:661 Species:Caenorhabditis elegans


Alignment Length:668 Identity:124/668 - (18%)
Similarity:223/668 - (33%) Gaps:230/668 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ASRLLTYSRNGKLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAKNF 73
            |:|.:....|.:||...|.....:..:      ||...|.     ||...::|::          
 Worm     2 ANRSIRDGDNPELLEERRMATFDTDKM------AAVIYGS-----EEFARRRREI---------- 45

  Fly    74 FIGVVDK-----ELLAYPEVIPRDEMAQLENSLLPLKNYFVE--PRETEETSPETLRQLGLYGLN 131
             ...|.|     ::..||.:...:::.:....:..|..|..:  .|:.||.|....|::      
 Worm    46 -TDAVSKIPELADIKPYPFLTREEKVTEGTRKISILTKYLNQLIDRDNEEESLHLHREV------ 103

  Fly   132 VSTDYEGKGYGWSASLMASEPDSTDINVTLGLQTHRVVVDLLKEVGTPLQQQRYLQDLATGKLIG 196
              ..|||..:....:|.                     :..|:...:..||:::|:.....::||
 Worm   104 --IGYEGHPFALHDALF---------------------IPTLQSQASDEQQEKWLERARRREIIG 145

  Fly   197 -----------------TEAIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGERQLFL 244
                             |.|:|:|:..|                        ||:.||       
 Worm   146 CYAQTELGHGSNLRNLETTAVYDIASQE------------------------FVLHTP------- 179

  Fly   245 VLAQTQQPNVPGVLGR------------------GTTIFLVDSQQE-------GVRLGE------ 278
              ..|.....||.||:                  |...|:|..:.|       ||.:|:      
 Worm   180 --TTTALKWWPGALGKSCNYALVVAELIIKRNNYGPHFFMVQLRDEKTHIPLKGVTVGDIGPKMN 242

  Fly   279 ----KHATFGCRKAEIRRVH--FEGVKLGED-QVVGLPHDGNRYSEQLVRSSRLRGSLV---GLS 333
                .:...|.....:.|.:  ....|:..| ..|..||....||..:    ::|..:.   ||.
 Worm   243 FNAADNGYLGLNNLRVPRTNLLMRHCKVEADGTYVKPPHAKIGYSGMV----KIRSQMAMEQGLF 303

  Fly   334 LAKKLLNELAQYT-------VNTTQCGVQLQDLELTRIH-----MSRAMCSVYAMESMLYLTAGL 386
            || ..|...|:|:       ::..|..|::.|.: |:.|     ::||...::.....::|.:.|
 Worm   304 LA-HALTIAARYSAVRRQGHLDDKQVEVKVLDYQ-TQQHRLFPSLARAYAFIFTGFETIHLYSQL 366

  Fly   387 LDEFRAQDVTLESAITKYFTLRQVYAIASQNLGVVGPKSLLSGETTELGLRDAAQLC-TQGESLD 450
            |     :||.:.:.    ..:..::|:.|      |.||:::.||.| |:..|...| ..|.|:.
 Worm   367 L-----KDVDMGNT----SGMADLHALTS------GLKSVVAHETGE-GIEQARMACGGHGYSMA 415

  Fly   451 ---TLGMFIALTGLQHAGQAM-----------------NTGVRKSRNPLFNPGHIFGKFLDNNSI 495
               ::...||:.|..:.|:.|                 ..|..|...|:       ..:|.:.|.
 Worm   416 SYISVVYGIAIGGCTYEGENMVMLLQLARYLVKSVELIKAGKAKKLGPV-------ASYLADKSD 473

  Fly   496 DNPKTKMQLSEHVHPSLEAAAQCIELSVARLQ------MAVELMFTKHGNAVVERQS--EMQRLA 552
            :...|          ||....:..| ::||.|      ..::||.:.....|...:|  |:.|.:
 Worm   474 ETDLT----------SLNGYVKMFE-NMARRQAWKATEKFLKLMESGESREVAWNKSAVELTRAS 527

  Fly   553 EVGTLIYAMWASVARASR 570
            .:.|.::.:.|.:.|.||
 Worm   528 RLHTRLFIIEAFMRRVSR 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 80/440 (18%)
CaiA 122..439 CDD:224871 70/386 (18%)
acox-1.2NP_493262.2 ACAD 12..635 CDD:299127 121/658 (18%)
PLN02443 14..658 CDD:178062 121/656 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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