DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acdh-1

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001370604.1 Gene:acdh-1 / 172358 WormBaseID:WBGene00016943 Length:427 Species:Caenorhabditis elegans


Alignment Length:480 Identity:101/480 - (21%)
Similarity:197/480 - (41%) Gaps:108/480 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SGASRLLTYSRNGKLLTRGRSTKATSSSLD-SQHQDAATTEGGRAESVEESPEQQRKLPTREPLA 70
            :..:::|..:.|  :::..||:.:|::::. |:|          .|....:|      |....|.
 Worm     3 TSTTKILKQAMN--IISTIRSSYSTATAVSISRH----------CEDFTGTP------PPVNLLT 49

  Fly    71 KN--FFIGVVDK-----------ELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEETSPETL 122
            :|  ||...|.|           |:..|.::.|.......||                       
 Worm    50 ENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFEN----------------------- 91

  Fly   123 RQLGLYGLNVSTDYEGKGYG-WSASLMASEPDSTDINVTLGLQTHRVV-VDLLKEVGTPLQQQRY 185
               ||.|::|..:|.|.|.. ::|.::..|...||.:|:..:..|..: |.::.:.||..|:.:|
 Worm    92 ---GLMGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 153

  Fly   186 LQDLATGKL---------IGTE--AIYEISPPEEDYFNTTAELFPEYGKWQLNGEKSFVICTPGE 239
            |..|.:..|         .|::  |:..|:..:.|:|             .::|.|.: |...||
 Worm   154 LPRLCSDSLASFCISESGAGSDAFALKTIAKRDGDHF-------------LISGTKMW-ITNSGE 204

  Fly   240 RQLFLVLAQTQQPNVPGVLGRGTTIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQ 304
            .|:|:|.|...    |....:|.|.|:|:...:|:.:.::....|.|.:...:|||:.|::.:..
 Worm   205 AQVFVVFANAD----PSQKYKGITCFIVERSADGLTVDKEEDKLGIRASSTCQVHFDNVRVHKSA 265

  Fly   305 VVGLPHDGNRYSEQLVRSSRLRGSLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRA 369
            ::|....|.:|:.:.:.:.|:......:.||:...::...|.....|.|.:|.|.:..:..:::|
 Worm   266 ILGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQGLQHQIAQA 330

  Fly   370 MCSVYAMESMLYLTAGLLDEFRAQDVTLESAITKYFTLRQVYAIASQN---LGVVG-----P--- 423
            ...:.|...::| .|..:.|:....|. |:|:.|.|..:...:.::|.   ||.||     |   
 Worm   331 RTEIEAARLLVY-NAARMKEYGIPYVR-EAAMAKLFASQVATSTSAQCVKWLGGVGFTKEFPAEK 393

  Fly   424 --KSLLSGE----TTELGLRDAAQL 442
              :..:.||    |:.:.|...|:|
 Worm   394 FYRDAMIGEIYEGTSNIQLNTIAKL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 82/381 (22%)
CaiA 122..439 CDD:224871 78/346 (23%)
acdh-1NP_001370604.1 SCAD_SBCAD 50..420 CDD:173847 90/415 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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