DRSC/TRiP Functional Genomics Resources

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Protein Alignment Egm and acdh-3

DIOPT Version :9

Sequence 1:NP_610687.1 Gene:Egm / 36242 FlyBaseID:FBgn0086712 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001370606.1 Gene:acdh-3 / 172351 WormBaseID:WBGene00019433 Length:419 Species:Caenorhabditis elegans


Alignment Length:424 Identity:106/424 - (25%)
Similarity:178/424 - (41%) Gaps:57/424 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SGASRLLTYSRNGKLLTRGRSTKATSSSLDSQHQDAATTEGGRAESVEESPEQQRKLPTREPLAK 71
            |..||.|..||:...:....|||..:      |.|.......:..|.|||        :.....:
 Worm     2 SSLSRSLLISRSAAPVVATMSTKPRA------HIDGHVPSPLQQLSEEES--------SIVGTVR 52

  Fly    72 NFFIGVVDKELLAYPEVIPRDEMAQLENSLLPLKNYFVEPRETEETSPETLRQLGLYGLNVSTDY 136
            .|.:.|:.      |.|...|:.:|:..|::         ..|.|.        ||.|:.:...|
 Worm    53 RFAVNVIK------PLVREMDDKSQMHQSVI---------TGTFEN--------GLMGIEIPEKY 94

  Fly   137 EGKGYG-WSASLMASEPDSTDINVTLGLQT-HRVVVDLLKEVGTPLQQQRYLQDLATGKLIGTEA 199
            .|.|.. :.|.|:..|....|.:|::.:.. :.:|..|:.::||..|:|:||..:.| :.||:.|
 Worm    95 GGPGSSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVT-EAIGSFA 158

  Fly   200 IYEISPPEEDY-FNTTAELFPEYGKWQLNGEKSFVICTPGERQLFLVLAQTQQPNVPGVLG-RGT 262
            :.|.....:.: ..|||:  .:...:.::|.|.: |...|..|.|||.|     |.....| :|.
 Worm   159 LSETGSGSDAFALKTTAK--KDGDDFVISGSKMW-ITNAGHAQFFLVFA-----NADSAKGYKGI 215

  Fly   263 TIFLVDSQQEGVRLGEKHATFGCRKAEIRRVHFEGVKLGEDQVVGLPHDGNRYSEQLVRSSRLRG 327
            |.||||..||||.:|:|....|.|.:....|||:.|::.:..::|....|.:|:.:.:.:.|:..
 Worm   216 TCFLVDRNQEGVSVGKKEDKLGIRASSTCSVHFDNVRVHKSSILGEYGKGYKYAIECLNAGRIGI 280

  Fly   328 SLVGLSLAKKLLNELAQYTVNTTQCGVQLQDLELTRIHMSRAMCSVYAMESMLYLTAGLLDEFRA 392
            ....|.||:...::...|.....|.|.:|.|.:..:..:.:....:.|...::|..|.:  :...
 Worm   281 GAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQIGQTRMEIEAARLLVYNAARM--KQNG 343

  Fly   393 QDVTLESAITKYFTLRQVYAIASQN----LGVVG 422
            .....|:|:.|.|. .||...|:..    ||.||
 Worm   344 LPFVREAAMAKLFA-SQVATTATSKCVEWLGGVG 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EgmNP_610687.1 ACAD 92..457 CDD:173838 87/339 (26%)
CaiA 122..439 CDD:224871 82/309 (27%)
acdh-3NP_001370606.1 SCAD_SBCAD 42..412 CDD:173847 94/378 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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