DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tou and RSC1

DIOPT Version :9

Sequence 1:NP_001097270.1 Gene:tou / 36241 FlyBaseID:FBgn0033636 Length:3131 Species:Drosophila melanogaster
Sequence 2:NP_011570.1 Gene:RSC1 / 852947 SGDID:S000003288 Length:928 Species:Saccharomyces cerevisiae


Alignment Length:1128 Identity:207/1128 - (18%)
Similarity:362/1128 - (32%) Gaps:410/1128 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   949 LNVAELRVP------------LELGWK------RETVI--RGLTKQGQIRGEVTY----YAPGST 989
            ||..:.|:|            .::.|.      :::||  ..:..:..|:|::.:    :.|..|
Yeast    57 LNTLKKRLPHYTSPQDFVNDFAQIPWNAMTYNAKDSVIYKYAILLESFIKGKIVHNIRKHYPEVT 121

  Fly   990 TPLKSNGQVFAILEQ--QPSNLSRENFSFSARAIVGSFLQPAPPPYANDGEYIRMTDEDVAKRLE 1052
            .|  |.|::..|..:  |||:||....:                           |.|:..|   
Yeast   122 YP--SLGRIPEIFAESMQPSDLSSNPIN---------------------------TQENDEK--- 154

  Fly  1053 DLKVFTRQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKARQEKNSKL----------EQQR 1107
                   ..||.|.::..||...::.:.|       ..|::...|:|||..          :...
Yeast   155 -------AGLNPEMKMAFAKLDSSITERK-------PTNQDYRMQQKNSPAFPTHSASITPQPLA 205

  Fly  1108 KDKELKNQQAVEE-------RKKRQEELDR---LKQEELLKKQQEKEKRRQEAILAKEQELQKQK 1162
            ....:.|...:..       |:.|...:|.   |:.:.:||            ::.:|.: |..|
Yeast   206 SPTPVVNYANITSAHPKTHVRRGRPPVIDLPYVLRIKNILK------------MMRREVD-QNNK 257

  Fly  1163 EMLLAAEM--ERERRRQHMSLIR----MLELRRKFEDRE-------KKKHQLVLDRLLLRERRMA 1214
            .:.|..|.  :|.....:.|:|.    ::::|:|.:.|:       ::..||:|....|...:..
Yeast   258 TLTLCFEKLPDRNEEPTYYSVITDPICLMDIRKKVKSRKYRNFHTFEEDFQLMLTNFKLYYSQDQ 322

  Fly  1215 ERKRDAEILQ-----LIR----RPNEDSEMPQELVIPELDRIAGNRLPGQAMADLLMVFEFLHNF 1270
            .....|::|:     |:|    :|:||.....||..| ||.:..|....| :.|.::    ||| 
Yeast   323 SNIIRAQLLEKNFNRLVRIELSKPDEDYLPEGELRYP-LDDVEINDEKYQ-IGDWVL----LHN- 380

  Fly  1271 GETLGFDMESLPSLQNLHDALMSDSNADAEEELLSVMTHLLVCAIEDPGVPNPGRHTTLLGQSLR 1335
                                                              ||             
Yeast   381 --------------------------------------------------PN------------- 382

  Fly  1336 NADITNSNVSEILRIYLYATATGEVRQMHGITVDRERERRVPDHHQLDSDTTTHSHSVKNQEYYK 1400
              ||....|.:|.|  |::|..|. :.::.....|. |:.|   |::|                :
Yeast   383 --DINKPIVGQIFR--LWSTTDGN-KWLNACWYFRP-EQTV---HRVD----------------R 422

  Fly  1401 LLHENDTWKLSQSLKDRP---------------FVALNPTRKAQMLAHLCNDLLMNKAVLRQIDG 1450
            |.::|:..|..| .:|.|               |...:|:.|                    ::|
Yeast   423 LFYKNEVMKTGQ-YRDHPIQDIKGKCYVIHFTRFQRGDPSTK--------------------VNG 466

  Fly  1451 SLETCAQMRKEKYMTDMKVRKYKALHMRKARIE-------------AYERAQAEREAAMQALMAQ 1502
            ....|.....|......|:|.:||....:.|.:             .|....|:      .|.|.
Yeast   467 PQFVCEFRYNESDKVFNKIRTWKACLPEELRDQDEPTIPVNGRKFFKYPSPIAD------LLPAN 525

  Fly  1503 QKLDAERLKAEEEAKAAAAEEAAAAAGTDGEATKGGSPNGEKPEDGDQNEEGAAKEPQQQQQQPM 1567
            ..|:.:..:..|.|..|.....|...|          |..|:.:.|:.:..........:...|.
Yeast   526 ATLNDKVPEPTEGAPTAPPLVGAVYLG----------PKLERDDLGEYSTSDDCPRYIIRPNDPP 580

  Fly  1568 EVDGVVDEASLVSPAKTIIQTDNSLTPSKQDMPTPTYQINGSST---PTTSGVTGGDMNVLLQAK 1629
            | :|.:|..:     .||| ||...|.|   ||    ::|.|||   ||           |.|.|
Yeast   581 E-EGKIDYET-----GTII-TDTLTTSS---MP----RVNSSSTIRLPT-----------LKQTK 620

  Fly  1630 ---KSGARNSINDEHHHDVSIIDDDLSDLDS--EITNVEEDEDNRLSADELQK-KLDKIVRASLN 1688
               .|..|:|.|      ..::..:.:...:  ::.|:.....|.||...:.| :...::..|..
Yeast   621 SIPSSNFRSSSN------TPLLHQNFNQTSNFLKLENMNNSSHNLLSHPSVPKFQSPSLLEQSSR 679

  Fly  1689 CKEALEKSTNQLRAACFGQDRFWRRYWKLPKAGGIFIEALESAQNDICDYHEALEAMDDKKDAND 1753
            .|....|...||.:..             ||         :.|....     .|.:|.:...|:.
Yeast   680 SKYHSAKKQTQLSSTA-------------PK---------KPASKSF-----TLSSMINTLTAHT 717

  Fly  1754 EKENSENEKDVAAESSEQPMEVDESITKLEDGVPASDVGMPESNQQNAHQDEEDDDDDVTEIN-- 1816
            .|.|..:....|..:...|:.::::|..::     |......||.:||........:|:...|  
Yeast   718 SKYNFNHIVIEAPGAFVVPVPMEKNIRTIQ-----STERFSRSNLKNAQNLGNTAINDINTANEQ 777

  Fly  1817 ---------KVEPEIVDLGDDDDDAAPPLPKIEPPRPEIKVKS--------EMELMGPPPTTMIS 1864
                     |:...::|.|:|       |.::...|...|.|.        |.::|.||      
Yeast   778 IIWFKGPGVKITERVIDSGND-------LVRVPLNRWFCKNKRRKLDYEDIEEDVMEPP------ 829

  Fly  1865 TKTDFE----AEIKIPSMPGILMPPTLN-----NNNTNNNNNNNGSDNCDKLETGLGLGQQQQNF 1920
              .||.    |.|..|       ||:||     |.:.::||::|..| ...:.:|...|::....
Yeast   830 --NDFSEDMIANIFNP-------PPSLNLDMDLNLSPSSNNSSNFMD-LSTIASGDNDGKECDTA 884

  Fly  1921 SQSVIKTEDVKKEDDCIIVSTSS 1943
            .:|..:.||.:.|.:...:.|:|
Yeast   885 EESEDENEDTEDEHEIEDIPTTS 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
touNP_001097270.1 HAT_MBD 953..1027 CDD:238691 18/99 (18%)
ZapA 1021..1127 CDD:294720 17/122 (14%)
MAP7 1043..1198 CDD:283355 32/187 (17%)
RILP-like 1085..>1179 CDD:304877 18/115 (16%)
DDT 1255..1317 CDD:280886 5/61 (8%)
WHIM1 1406..1455 CDD:292246 8/63 (13%)
WHIM3 2190..2224 CDD:292248
PHD_BAZ2A_like 2640..2685 CDD:277020
RanBP2-type Zn finger 2640..2659 CDD:275375
RanBP2-type Zn finger 2680..2698 CDD:275376
PHD 2695..2744 CDD:279022
Bromo_BAZ2A_B_like 3027..3123 CDD:99935
RSC1NP_011570.1 Bromo_Rsc1_2_I 8..113 CDD:99952 9/55 (16%)
COG5076 115..463 CDD:227408 88/502 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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