DRSC/TRiP Functional Genomics Resources

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Protein Alignment tou and pbrm1

DIOPT Version :9

Sequence 1:NP_001097270.1 Gene:tou / 36241 FlyBaseID:FBgn0033636 Length:3131 Species:Drosophila melanogaster
Sequence 2:XP_009304062.1 Gene:pbrm1 / 565366 ZFINID:ZDB-GENE-080926-4 Length:1627 Species:Danio rerio


Alignment Length:1239 Identity:207/1239 - (16%)
Similarity:407/1239 - (32%) Gaps:417/1239 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   857 GSSSYKEGRPRNLGRGVSKPKKNTVASLLAQSRAVGLKPMLATQQLLQQGADIEKIRLA----LS 917
            ||..:|:.              ||:..:.||.     |..|...:.::....|...|.|    ||
Zfish   266 GSQVFKDA--------------NTIKKVFAQK-----KLELEHSEPIKCSIRIRNRRFAHGDRLS 311

  Fly   918 EANAHMETSTDSESVAAESG---LSESESEDANILNVAELRVPLELGWKRETVIRGL-TKQGQIR 978
            .....::..::||..|..:|   ..|.|||..:|.:..::..|:   ::....:||: ..|||:.
Zfish   312 CITTALQYGSESEEDAILTGSVHYDEVESEAESIHSSMDVSNPI---FQMYEAVRGVRNSQGQLL 373

  Fly   979 GEVTYYAPGSTTPLKSNGQVFAILEQQPSNLSRENFSFSARAIVGSFLQPAPPPYA--------- 1034
            .|..:..|                       ||:::.        .:.|....|.:         
Zfish   374 AEPFFQLP-----------------------SRKDYP--------DYFQQISHPVSLQQIRSKMK 407

  Fly  1035 -NDGEYIRMTDEDVAKRLEDLKVFTRQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKARQE 1098
             |:.|.:...|.|:.:..|:.|.:...:..:.:|  :.|.|..:    :::::||.|..:   ::
Zfish   408 NNEYESVEQIDTDLNRMFENAKRYNVPSSQIYKR--VLKLQHIL----QMKRKELTRRDD---ED 463

  Fly  1099 KNSKLEQQRKDKELKNQQAVEERKKRQEELDRLKQEELLKKQQEKEKRRQEAILAKEQELQKQK- 1162
            .:|:|.....|.....:::.::..|                     |.|.:|:||...|.::.. 
Zfish   464 GDSRLSSTLSDGGSTKRKSHKKNTK---------------------KNRMKALLAAVAETREMGT 507

  Fly  1163 -----EMLLAAEMERERRRQHMSLIRMLELR----RKFEDREKKKHQLVLD-RLLLRERRMAERK 1217
                 ::.:....:::....:..::..:::|    ....|:...:..::.| :|:.|..|....:
Zfish   508 GRRLCDLFMVKPSKKDYPDYYKIILEPMDMRIIEHNIRSDKYPNEDSMMEDMKLMFRNARHYNEE 572

  Fly  1218 -----RDAEILQLIRR---------PNEDSEMPQELVIPELDRIAGNRLPGQA------MADLLM 1262
                 .||.||:.|.|         |::|     |:|.|:|........|.::      ...|..
Zfish   573 GSRVYNDANILEKILREKRKELGPPPDDD-----EIVSPKLKIRKSGISPKKSKYLTPLQQKLNE 632

  Fly  1263 VFEFLHNFGETLGFDMES----LPSLQNLHDALMS-DSNADAEEELLSVMTHLLV-------CAI 1315
            ::|.:.|:.:..|..:.:    |||...|.|..:: ....|.|:    :.:|:|.       ..:
Zfish   633 LYEAVKNYTDKRGRRLSTIFLRLPSRAELPDYYVAIKKPIDMEK----IKSHMLANKYQDVDALV 693

  Fly  1316 EDPGVPNPGRHTTLLGQSLRNADITNSNVSEILRIYLYATATGEVRQMHGITVDRER------ER 1374
            ||            |.....||...|...|.|.:         :...:|.:.::..|      :.
Zfish   694 ED------------LVLMFNNACTYNEPESLIYK---------DALVLHKVLLETRRDLEGGDDA 737

  Fly  1375 RVPDHHQLDSDTTTHSHSVKNQEYYKLLHENDTWK-LSQSLKDRPFVALNPTRKAQMLAHLCNDL 1438
            .|||..:|..:.      |:|.....|.|::|..: .|.||.:.|  |::|.         |:|.
Zfish   738 HVPDVARLIQEL------VRNLFVSVLGHQDDEGRCYSDSLAEIP--AVDPN---------CSDK 785

  Fly  1439 L-MNKAVLRQIDGSLETCAQMRKEKYMTDMKVRKYKALHMRKARIEAYE---------------- 1486
            . :|..::|   .:::.....|.:.:...|.....||..:.:...|.:|                
Zfish   786 TPLNFEIIR---ANVDKGRYRRLDVFQDQMFEVLEKARRLHRTDSEIFEDSVELQQFFIRIRDEL 847

  Fly  1487 -------------------RAQAEREAAMQALMAQQKL----DAERLKAEEEAKAAAAEEAAAAA 1528
                               .:..|:|       .::||    :.::||.|||.|.|...|..|..
Zfish   848 CKNGEILLTPALSYTIKHLHSDVEKE-------KKEKLPKEYEEDKLKREEEKKEAEKSEDTAGG 905

  Fly  1529 GTDGEATKGGSPNGEKPEDGDQNEEGAAKEPQQQQQQPMEVDGVV-------DEAS--------L 1578
            |..|...:..|.:....::.....:....||.:...||    .:|       |:|.        .
Zfish   906 GWQGALQRNYSQDCSFKDNMYHVGDYVYVEPTEPNLQP----HIVCIERLWQDDAGENWLYGCWF 966

  Fly  1579 VSPAKT------------IIQTD--NSLTPSK--------------------------------- 1596
            ..|.:|            :.::|  |.:..||                                 
Zfish   967 YRPNETFHLATRKFLEKEVFKSDYYNKIPVSKILGKCVVMFVKEYFKLQPDSFRPEDVFVCESRY 1031

  Fly  1597 ------------------------QDMPTPTYQINGSSTPTTSGVTGGDMNVLLQAKKSGARNSI 1637
                                    :::|.|..::.....|               .::|.....:
Zfish  1032 SAKTKSFKKIKMWTMPLSSVKFVPREVPLPVVRVASMFAP---------------KQESEKPPEV 1081

  Fly  1638 NDEHHHDVSIIDDDLSDLDSEITNVEE--DEDNRLSADELQKKLDKIVRASLNCKEALEKSTNQL 1700
            .::.....|:||.:..|:..|:.|.|.  ....:|..:.:..|:...|..         :|...:
Zfish  1082 TEDDKALPSVIDKEKEDITLEVNNGEPGCQYYEQLCYNNIWLKVGDCVYI---------RSHGLV 1137

  Fly  1701 RAACFGQDRFWRRYWKLPKAGGIFIEALESAQNDICDYHEA---LEAMDDK-------------- 1748
            |......::.|.|.......|.|||...|:.......:::.   |..:::.              
Zfish  1138 RNRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCIGGKCTVSS 1202

  Fly  1749 -KDANDEKENSENEKDV-AAES----SEQPMEVDESITK-------LEDG--------VPASDVG 1792
             ||....:.....|:|| ..||    ||:.|:..:.:.:       :||.        ||..:  
Zfish  1203 FKDFLSCRPTEMPEEDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEIYYFRKLIVPQKE-- 1265

  Fly  1793 MPESNQQNAHQDEEDDDDDVTEINKVEPEIVDLGDDDDDA--APPLPKIEPPRPEIKVKSEMELM 1855
             |....:...::.|....|:|     :.|:.||||||.|.  |..:|::     :.::..:|:::
Zfish  1266 -PSPLLEKKIEELEAKFADMT-----DEELDDLGDDDGDGSDAHCMPQL-----QTQLSGDMDML 1319

  Fly  1856 GPPP 1859
            ...|
Zfish  1320 HYAP 1323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
touNP_001097270.1 HAT_MBD 953..1027 CDD:238691 10/74 (14%)
ZapA 1021..1127 CDD:294720 18/115 (16%)
MAP7 1043..1198 CDD:283355 22/164 (13%)
RILP-like 1085..>1179 CDD:304877 13/99 (13%)
DDT 1255..1317 CDD:280886 13/79 (16%)
WHIM1 1406..1455 CDD:292246 11/50 (22%)
WHIM3 2190..2224 CDD:292248
PHD_BAZ2A_like 2640..2685 CDD:277020
RanBP2-type Zn finger 2640..2659 CDD:275375
RanBP2-type Zn finger 2680..2698 CDD:275376
PHD 2695..2744 CDD:279022
Bromo_BAZ2A_B_like 3027..3123 CDD:99935
pbrm1XP_009304062.1 Bromo_polybromo_I 45..156 CDD:99954
Bromo_polybromo_II 183..284 CDD:99948 7/36 (19%)
Bromo_polybromo_III 352..453 CDD:99951 21/140 (15%)
Bromo_polybromo_IV 488..591 CDD:99949 19/123 (15%)
Bromo_polybromo_V 626..730 CDD:99946 22/128 (17%)
Bromo_polybromo_VI 745..850 CDD:99956 22/124 (18%)
BAH_polybromo 923..1042 CDD:240068 13/122 (11%)
BAH_polybromo 1120..1238 CDD:240068 22/126 (17%)
HMG 1341..1408 CDD:197700
Forkhead_N 1415..1541 CDD:254796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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