DRSC/TRiP Functional Genomics Resources

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Protein Alignment tou and Brd4

DIOPT Version :9

Sequence 1:NP_001097270.1 Gene:tou / 36241 FlyBaseID:FBgn0033636 Length:3131 Species:Drosophila melanogaster
Sequence 2:NP_001094373.1 Gene:Brd4 / 362844 RGDID:1307282 Length:1403 Species:Rattus norvegicus


Alignment Length:648 Identity:128/648 - (19%)
Similarity:207/648 - (31%) Gaps:253/648 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  2524 QATPSKKQQQKKNKKEQQLTPNGKESKSKSAINKPENQAPLSIKINLKALAQNGQCLLKTKTPPI 2588
            |.:.::.|.|.::.......|...|:.:.:...:..||....:::.||.                
  Rat    25 QMSTTQAQAQPQSANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKT---------------- 73

  Fly  2589 LTKSPTASPSSHPNTSDSDS------DFGK--RTKKKSGGKRRRSANN--TNSSK----YSNSLQ 2639
            |.|...|.|...|    .|:      |:.|  :|....|..::|..||  .|:.:    ::....
  Rat    74 LWKHQFAWPFQQP----VDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFT 134

  Fly  2640 NCQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYECVNKATNERKCIVCGGHRPS 2704
            || :..:...:|.:|:.:..:|     .|..|::.:|             |.|.:.::.      
  Rat   135 NC-YIYNKPGDDIVLMAEALEK-----LFLQKINELP-------------TEETEIMIV------ 174

  Fly  2705 PVGKMIYCDLCPRAYHADCYIPPLLKVPRGKWYCHGCISRAPPPKKRSAGGTSGSSSKSRRDRDR 2769
                                                           .|.|         |.|.|
  Rat   175 -----------------------------------------------QAKG---------RGRGR 183

  Fly  2770 ESGGSAK-------RRSDNSKTPAMEHMQQQQMPLAGGDSHHHHHQQPPSLNSSHDESMNSLPAA 2827
            :..|:||       ..:..|.:|      |.|||           ||.|                
  Rat   184 KETGTAKPGVSTVPNTTQASTSP------QTQMP-----------QQNP---------------- 215

  Fly  2828 PLSPAHSVVSATNYDDQHHANNSVDGSSRFHAHLIPPSNNGTAALLEDVPGGANVMPGVYPVYTP 2892
                                               ||            |..|...|  :|..||
  Rat   216 -----------------------------------PP------------PVQATTHP--FPAVTP 231

  Fly  2893 VAAGNFSAGLINQAPVQPAMPFANVVAMSPRAVTPTRTRTPTPTPAPTPPPPPPTPLLMQASPTA 2957
                    .||.|.||...:|             |...:||:|.|...||||.|.|..:|:.|..
  Rat   232 --------DLIAQPPVMTMVP-------------PQPLQTPSPVPPQPPPPPAPVPQPVQSHPPI 275

  Fly  2958 TALHVNACQSPPQQQHAQLMTMPS-------PPAIGVGTATNQMSPPPINIHAIQEAKEKLKQEK 3015
            .|......::....:.....|.|:       ||::.....|.::.|.       :|:...:|..|
  Rat   276 IATTPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLAPEPKTAKLGPR-------RESSRPVKPPK 333

  Fly  3016 K-----EKH----ATKKLMKELAVCKTLLGEMELHED---SWPFLLPVNTKQ--FPTYRKIIKTP 3066
            |     ::|    .:.|:.::|..|..:|.||...:.   :|||..||:.:.  ...|..|||.|
  Rat   334 KDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHP 398

  Fly  3067 MDLSTIKKKLQDLSYKTREDFCVDVRQIFDNCEMFNEDDSPVGKAGHGMRKFFESRWGELTDK 3129
            ||:||||.||:...|:..::|..|||.:|.||..:|..|..|......::..||.|:.::.|:
  Rat   399 MDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
touNP_001097270.1 HAT_MBD 953..1027 CDD:238691
ZapA 1021..1127 CDD:294720
MAP7 1043..1198 CDD:283355
RILP-like 1085..>1179 CDD:304877
DDT 1255..1317 CDD:280886
WHIM1 1406..1455 CDD:292246
WHIM3 2190..2224 CDD:292248
PHD_BAZ2A_like 2640..2685 CDD:277020 8/44 (18%)
RanBP2-type Zn finger 2640..2659 CDD:275375 4/18 (22%)
RanBP2-type Zn finger 2680..2698 CDD:275376 2/17 (12%)
PHD 2695..2744 CDD:279022 0/48 (0%)
Bromo_BAZ2A_B_like 3027..3123 CDD:99935 36/100 (36%)
Brd4NP_001094373.1 Bromo_Brdt_I_like 58..164 CDD:99929 25/131 (19%)
Bromo_Brdt_II_like 354..455 CDD:99930 36/100 (36%)
BET 610..674 CDD:293640
BRD4_CDT 1361..1403 CDD:293710
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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