DRSC/TRiP Functional Genomics Resources

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Protein Alignment tou and Lint-1

DIOPT Version :9

Sequence 1:NP_001097270.1 Gene:tou / 36241 FlyBaseID:FBgn0033636 Length:3131 Species:Drosophila melanogaster
Sequence 2:NP_001285113.1 Gene:Lint-1 / 32055 FlyBaseID:FBgn0030274 Length:602 Species:Drosophila melanogaster


Alignment Length:783 Identity:144/783 - (18%)
Similarity:264/783 - (33%) Gaps:261/783 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  2003 QYYSIPMDECKVDTSKLGNECIFSLSGLDEKQMLAKVEEYKAHKVESKNGLGSPHRHHETKDDEE 2067
            :||.:|::        |.|:.|:....|  :..|      |.|.:.|           |..|::.
  Fly    19 KYYVLPLE--------LKNDIIYCQRSL--RDFL------KVHALVS-----------EVFDEQA 56

  Fly  2068 QAKLKLDKEIDTEMETDADDLAGKEKFFRLRSDVPPDTGGGVSEGTDVKPKIELRLDEALSQAYY 2132
            .|.....:.|..|:|.:..::..:::|..||.:             |...:..::|.|       
  Fly    57 DADPVQMRRILDELEEEVYEINAEQQFLLLRLN-------------DSLQEFSVKLKE------- 101

  Fly  2133 HNIANMSLSSV-QTYIPIDIPLPLSMTPDEHRLLEQVKLAGFPERVHGVYVPRRQRYGWWQLDDE 2196
            :||  |.|..: ..|:...: :||.:.|: ::::.|..:|...|                    |
  Fly   102 NNI--MFLPDIAHEYVSAQV-VPLIVDPN-YKIMPQSVMARDTE--------------------E 142

  Fly  2197 QKLRQ--LLKTLNPSG---LRERELQENLQRFLGLEQPLGVNYKLKSDIDFPEEFLMPDKKGDWN 2256
            ..:|:  ||...:.||   |:..||.||:        ||               .|.|..:|   
  Fly   143 MLIRKHFLLSQDDDSGMPPLKLSELDENI--------PL---------------MLAPPVRG--- 181

  Fly  2257 PKVAKRVELALIEQLESLEDKVASASMQLKNWQLPNRVESEL---TLDSQEDVTEEDFVSIIPMI 2318
              :.::: .|:..:.|.|:...|:.|:.    ..|.:.:|:|   :|||            .|..
  Fly   182 --LGQQI-AAVKPEPEWLQGDEATVSVP----PPPPQSKSKLMKGSLDS------------TPAK 227

  Fly  2319 RERIIDLEANIERRYLKPPLG--SQTGDAHLAVIAQ---------NQHTTTQTQNSASAAAYLLQ 2372
            ||.|        .|...|||.  :||..|.|:.:..         |.|...|::.:...|  |.:
  Fly   228 RENI--------SRSSPPPLAPITQTVVAELSQVPPSPQAESPPVNFHVVAQSRKNLQQA--LRR 282

  Fly  2373 MQQQQQQQQLAQQQQ--------------QQQQGSGAGNSLNPSSFNERTMALAAAAAASGPG-- 2421
            .::.:||.:|...::              :...|.|...||.|::......|.......|..|  
  Fly   283 ARKTKQQPRLFDDEEDLEITSLQNDRNKNRTSDGKGTPPSLEPTNAAANQAAKKTIPQMSSQGMA 347

  Fly  2422 --NATGVANSAVVAGATPCESGSGEPNSGNASPASNCDSDRDEKVEQIPKGLVQWRDAVSRSHTT 2484
              |.....|:...:..||..||..:|...::..:.:..::..::.::......||||....|.|.
  Fly   348 KNNTAKSKNTCRKSSPTPTSSGQSQPAVSSSGSSDDSSAELQQEQQRRVASAAQWRDEPRESRTQ 412

  Fly  2485 AQLAMALYVLESCVAWDKSIMKAYATKNKSSKKKSSAKKQATPSKKQQQKKNKKEQQLTPN--GK 2547
            .:    .|..|:.:    .:.:.|:.:               ..||..|:.:|::::...|  |.
  Fly   413 PE----EYGQETFL----GLFELYSPE---------------VLKKLSQRHSKRKRRTVQNASGV 454

  Fly  2548 ESKSKSAINKPENQAPLSIKINLKALAQNGQCLLKTKTPPILTKSPTASPSSHPNTSDSDSDFGK 2612
            :......:|          .::...:...||...|.|:..:|      ||:.....::|...:.:
  Fly   455 DFHYGQQLN----------AVDALVMGVRGQKKTKEKSEFLL------SPTEKRLQANSKRTYTR 503

  Fly  2613 RTKKKSGGKRRRSANNTNSSKYSNSLQNCQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPD 2677
            ::|.......:.||...:.:..:.|...||....|.::     |..|.:                
  Fly   504 KSKSPDEISEKSSAGGGSGASGTASSSACQHKDGGASK-----CRKCRE---------------- 547

  Fly  2678 GDWYCYECVNKATNERKCIVCGGHRPSPVGKMIYCDLCPRAYHADCY---------------IPP 2727
                |.||..:...|                .:||.||...||.||:               .||
  Fly   548 ----CRECKRRVETE----------------AMYCHLCSGLYHMDCHEFTKNRQLMQLQNSRCPP 592

  Fly  2728 LLK 2730
            .|:
  Fly   593 CLR 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
touNP_001097270.1 HAT_MBD 953..1027 CDD:238691
ZapA 1021..1127 CDD:294720
MAP7 1043..1198 CDD:283355
RILP-like 1085..>1179 CDD:304877
DDT 1255..1317 CDD:280886
WHIM1 1406..1455 CDD:292246
WHIM3 2190..2224 CDD:292248 11/38 (29%)
PHD_BAZ2A_like 2640..2685 CDD:277020 6/44 (14%)
RanBP2-type Zn finger 2640..2659 CDD:275375 4/18 (22%)
RanBP2-type Zn finger 2680..2698 CDD:275376 4/17 (24%)
PHD 2695..2744 CDD:279022 11/51 (22%)
Bromo_BAZ2A_B_like 3027..3123 CDD:99935
Lint-1NP_001285113.1 PHD 548..593 CDD:214584 13/60 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0383
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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