DRSC/TRiP Functional Genomics Resources

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Protein Alignment tou and chd-3

DIOPT Version :9

Sequence 1:NP_001097270.1 Gene:tou / 36241 FlyBaseID:FBgn0033636 Length:3131 Species:Drosophila melanogaster
Sequence 2:NP_510140.1 Gene:chd-3 / 181421 WormBaseID:WBGene00000482 Length:1787 Species:Caenorhabditis elegans


Alignment Length:392 Identity:91/392 - (23%)
Similarity:146/392 - (37%) Gaps:83/392 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  2421 GNATGVANSAVVAGATPCESGSGEPNSGNASPASNCDSDRDEKVEQIPKGLVQWRDAVSRSH--- 2482
            |:.|...:|.:..|....|...||......:..|.......||.:..||.....:.:..:.:   
 Worm    11 GDETMEEDSMLAEGHEDGEEDVGEDEEEVETEESQGVPTTSEKKKPPPKKKKGGKKSSKKKNNCD 75

  Fly  2483 -------TTAQLAMALYVLESCVAWDKSIMKAYAT-KNKSSKKKSSAKK--QATPSKKQ----QQ 2533
                   |:|:::.|:.:.:..|.:::...::... ||.||..|....|  ..|...|.    |.
 Worm    76 YPDPYKSTSAEISAAIGLTDVDVDYEQEEFQSITNLKNFSSLVKPYILKVNPGTNVTKMYPLFQV 140

  Fly  2534 KKNKKEQQLTPNGKE-SKSKSAINKPENQAPLSIKINLKALAQNGQCLLKTKTPPILTKSPTASP 2597
            |..:.:..:|.:||. .|.:.|...|   .|:.:....|.:.|        ||.....:......
 Worm   141 KYKEFQDHMTAHGKSIQKQQRAKFVP---VPVPVTPQEKIIPQ--------KTRSSARRKRRDGS 194

  Fly  2598 SSHPNTSDSDSDFG---KRTKKKSG------------------GKRRRSANNTNSSKYS------ 2635
            .......|||.:|.   |:.:|:..                  .||:.:..:..:||.:      
 Worm   195 DGEGGGHDSDQEFEALIKQHEKQQDEAEKGKEEARINRAAAKVDKRKAALESARASKRARKEQGV 259

  Fly  2636 ---NSLQNCQFCTSGENED-KLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYECVNKA------- 2689
               |..:||:.|    |:| :|:|||.|.:.||..|....|:..|:|||.|..|....       
 Worm   260 VEENHQENCEVC----NQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGPDVLIVE 320

  Fly  2690 -----TNERKCIVCGGHRPSPVGKMIYCDLCPRAYHADCYIPPLLKVPRGKWYCHGCISRAPPPK 2749
                 .|...|.:|     .....::.||.||.:|||.|..|||.::|.|:|.|..||  .|.|.
 Worm   321 EEPAKANMDYCRIC-----KETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCI--IPEPA 378

  Fly  2750 KR 2751
            :|
 Worm   379 QR 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
touNP_001097270.1 HAT_MBD 953..1027 CDD:238691
ZapA 1021..1127 CDD:294720
MAP7 1043..1198 CDD:283355
RILP-like 1085..>1179 CDD:304877
DDT 1255..1317 CDD:280886
WHIM1 1406..1455 CDD:292246
WHIM3 2190..2224 CDD:292248
PHD_BAZ2A_like 2640..2685 CDD:277020 19/45 (42%)
RanBP2-type Zn finger 2640..2659 CDD:275375 9/19 (47%)
RanBP2-type Zn finger 2680..2698 CDD:275376 5/29 (17%)
PHD 2695..2744 CDD:279022 19/48 (40%)
Bromo_BAZ2A_B_like 3027..3123 CDD:99935
chd-3NP_510140.1 CHDNT 97..149 CDD:285335 11/51 (22%)
TNG2 <180..311 CDD:227367 34/142 (24%)
PHD1_CHD_II 268..309 CDD:277006 18/44 (41%)
PHD2_CHD_II 330..372 CDD:277007 17/46 (37%)
CHROMO 381..461 CDD:237991 91/392 (23%)
CHROMO 501..555 CDD:214605
SNF2_N 619..915 CDD:278600
DEXDc 636..794 CDD:238005
Helicase_C 940..1054 CDD:278689
DUF1087 1199..1252 CDD:283996
DUF1086 1299..1418 CDD:283992
CHDCT2 1511..1687 CDD:285336
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0383
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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