DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment en and hoxa5

DIOPT Version :9

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:224 Identity:68/224 - (30%)
Similarity:107/224 - (47%) Gaps:33/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 PAAP-TMTQPPLSSSASSLASPPPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGA 372
            |:.| :.|:|..:..|:|..||||.....|..:||.|:.|.....:..:::.::.::|.:|..|.
 Frog    74 PSNPSSSTEPRYNQPAASAHSPPPDPLPCTAVATSPVSDSHQGGKNSITNSNNTTSNSSNSSTGT 138

  Fly   373 S----GSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSD 433
            |    ..|:.|||.           :.|....|||...|:...:.....:.:::| |:.....|.
 Frog   139 STHINRDGLGASSG-----------AEDDAPASSDQASSQNSQSPAPSVQPQIYP-WMRKLHISH 191

  Fly   434 RPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQI 498
            ....||             :.||.|||::..|...|::||:.|||||.|||.:::..|.|:|.||
 Frog   192 DNIGGP-------------EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQI 243

  Fly   499 KIWFQNKRAKIKKSTGSKNPLALQLMAQG 527
            ||||||:|.|.||....|   ::.:.|.|
 Frog   244 KIWFQNRRMKWKKDNKLK---SMSMAAAG 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeobox 457..510 CDD:278475 28/52 (54%)
Engrail_1_C_sig 512..541 CDD:287495 3/16 (19%)
hoxa5NP_001011405.1 Homeobox 203..256 CDD:365835 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.