DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment en and HOXC13

DIOPT Version :9

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_059106.2 Gene:HOXC13 / 3229 HGNCID:5125 Length:330 Species:Homo sapiens


Alignment Length:285 Identity:71/285 - (24%)
Similarity:115/285 - (40%) Gaps:59/285 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 SDANPEKS----ALGSLCKAV--------SQIGQPAAP-------TMTQPPLSSSASSLASPPPA 332
            |.|:|.|:    .|||.|.|.        ..:|:|.||       ..|..|...:|...| ||||
Human    47 SGASPGKAPSMDGLGSSCPASHCRDLLPHPVLGRPPAPLGAPQGAVYTDIPAPEAARQCA-PPPA 110

  Fly   333 SNASTISSTSSVATSSSSSSSGCSSAASSLN--------------SSPSSRLGASGSGVNAS--- 380
            ...|: |:|.........|..|| ..:.::|              ..||..|........|.   
Human   111 PPTSS-SATLGYGYPFGGSYYGC-RLSHNVNLQQKPCAYHPGDKYPEPSGALPGDDLSSRAKEFA 173

  Fly   381 -----SPQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEG----GKNEMWPAWVYCTRYSDRPS 436
                 :...|.:|....||...|:....:.|.: .....||    ..:..|.:.|||::  ::..
Human   174 FYPSFASSYQAMPGYLDVSVVPGISGHPEPRHD-ALIPVEGYQHWALSNGWDSQVYCSK--EQSQ 235

  Fly   437 SGPRYRR------PKQPK-DKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLN 494
            |...::.      |.||: ......::.|..::..||..|::|:..::::|:.:|:::|:...|:
Human   236 SAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLS 300

  Fly   495 EAQIKIWFQNKRAKIKKSTG-SKNP 518
            |.|:.|||||:|.|.||... ||.|
Human   301 ERQVTIWFQNRRVKEKKVVSKSKAP 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeobox 457..510 CDD:278475 18/52 (35%)
Engrail_1_C_sig 512..541 CDD:287495 3/8 (38%)
HOXC13NP_059106.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..50 1/2 (50%)
HoxA13_N 54..166 CDD:315049 27/114 (24%)
HOX 260..312 CDD:197696 16/51 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I5040
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.050

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