DRSC/TRiP Functional Genomics Resources

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Protein Alignment en and HOXA13

DIOPT Version :9

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_000513.2 Gene:HOXA13 / 3209 HGNCID:5102 Length:388 Species:Homo sapiens


Alignment Length:426 Identity:98/426 - (23%)
Similarity:148/426 - (34%) Gaps:143/426 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 KPSLAFSISN---ILSDRFGDVQKPGKSMENQASIFRPFEASRSQTATPSAFTRVDLL----EFS 227
            :|::.|...|   :::|..      .|:||..|:......|:.:..|....|......    .||
Human    13 EPTVMFLYDNGGGLVADEL------NKNMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFS 71

  Fly   228 RQQQAAAAAATAAMMLERANFLNCFNPAAYPRIHEEIVQSRLRRSAANAVIPPPMSSKMSDANPE 292
            ....||||||.||.        .|.|..|:|        :.|...||:|     .||...:|.|.
Human    72 VAAAAAAAAAAAAN--------QCRNLMAHP--------APLAPGAASA-----YSSAPGEAPPS 115

  Fly   293 KSALGSLCKAVSQIGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSSVATSSSSSSSGCSS 357
            .:|..:...|.:     ||        :::|||...|.||..|         ...::...|.||:
Human   116 AAAAAAAAAAAA-----AA--------AAAASSSGGPGPAGPA---------GAEAAKQCSPCSA 158

  Fly   358 AASSLNSSPSSRLGASGSGVNASS---PQPQPI----PPPSAVS----RDSGMESSDDTRSETGS 411
            ||.|.:...:...|..|||....:   |.|..|    .|.||.:    .|..|:::.....|..|
Human   159 AAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAEEFSS 223

  Fly   412 TTTE-------------------------------GGKNEM--------------------WPAW 425
            ...|                               ||..|.                    |...
Human   224 RAKEFAFYHQGYAAGPYHHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQ 288

  Fly   426 VYCTRYS---------------DRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNE 475
            :||.:..               ..||....|||          .::.|..::..||..|:||:..
Human   289 MYCPKEQAQPPHLWKSTLPDVVSHPSDASSYRR----------GRKKRVPYTKVQLKELEREYAT 343

  Fly   476 NRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKK 511
            |:::|:.:|:::|:...|:|.|:.|||||:|.|.||
Human   344 NKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeobox 457..510 CDD:278475 20/52 (38%)
Engrail_1_C_sig 512..541 CDD:287495 98/426 (23%)
HOXA13NP_000513.2 HoxA13_N 85..222 CDD:403486 42/179 (23%)
Homeobox 325..379 CDD:395001 20/53 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I5040
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.960

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