DRSC/TRiP Functional Genomics Resources

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Protein Alignment en and hoxb4a

DIOPT Version :10

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:215 Identity:58/215 - (26%)
Similarity:85/215 - (39%) Gaps:65/215 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 PTMTQPPLSSSASSLASPP------PASNASTIS------STSSVATSSSSSSSGCSSAASSLNS 364
            |:.....:....|..|.||      |...|:.||      .|::::|.....|..|.|..     
Zfish    44 PSFQHESIYHQRSGCADPPYSSCQGPGQPAAVISPRGHVLPTTALSTPLPEPSHHCDSVT----- 103

  Fly   365 SPSSRLGASGSGVNASSPQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNEM---WPAWV 426
                                 |.|||:.          ..|.:...::|....|:.:   |...|
Zfish   104 ---------------------PSPPPAC----------GQTPTSQNTSTVSSRKDPVVYPWMKKV 137

  Fly   427 YCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSEL 491
            :....|...|.|              :.||.|||::.:|:..|::||:.|||||.|||.:::..|
Zfish   138 HVNIVSPNYSGG--------------EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTL 188

  Fly   492 GLNEAQIKIWFQNKRAKIKK 511
            .|:|.||||||||:|.|.||
Zfish   189 CLSERQIKIWFQNRRMKWKK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeodomain 455..511 CDD:459649 30/55 (55%)
Engrail_1_C_sig 512..542 CDD:431338 58/215 (27%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 20/116 (17%)
Antp-type hexapeptide 130..135 1/4 (25%)
Homeodomain 152..208 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246
Blue background indicates that the domain is not in the aligned region.

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