DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment en and rsc58

DIOPT Version :9

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_593010.1 Gene:rsc58 / 2541419 PomBaseID:SPAC1F3.07c Length:403 Species:Schizosaccharomyces pombe


Alignment Length:313 Identity:60/313 - (19%)
Similarity:92/313 - (29%) Gaps:125/313 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 AVIPPPMSSKMSDANPEKSALGSLCKAVSQIGQPAAPTMTQPPLS-----------SSASSLASP 329
            |::|.|     |.||.::..|..|          :.|:..:||.|           .:...|.|.
pombe   159 ALLPTP-----SVANSQEYTLDKL----------SPPSTAKPPASVIEFNPSLAKLPTVKYLQSG 208

  Fly   330 PPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGASGSGVNASSPQPQPIPPPSAVS 394
            |.:|.|...:|:|||...||..|..|..|:|....:|..:                        |
pombe   209 PFSSIAPYKNSSSSVIPDSSFHSVACYRASSHYKEAPVEK------------------------S 249

  Fly   395 RDSGMESSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRT 459
            .|..:..::.:..|..|.|:.                   |..|                     
pombe   250 IDIDIIQNNLSLLEEDSWTSV-------------------PIQG--------------------- 274

  Fly   460 AFSSEQLARLKREFNENRYLTERR---RQQLSSELGLNEAQIKIWFQNKRAKIKKSTGSK----- 516
                 :|..|.:.....:.|..:|   ...||.|    |.||.:..||...|:.|.....     
pombe   275 -----ELVELNKLLQHLQLLQNQRITSHNVLSDE----ERQISVQVQNLILKLAKDYDMSPEDFL 330

  Fly   517 -NPLALQLMAQGLYNHTTVPLTKEEEEL-----------------EMRMNGQI 551
             :...|.|...|.:...|:||:.:..||                 .:.|||.:
pombe   331 MDDFTLSLTQYGAFYRGTLPLSAQPLELPSQQLLRSQSNAALRSNSLSMNGSL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeobox 457..510 CDD:278475 13/55 (24%)
Engrail_1_C_sig 512..541 CDD:287495 6/34 (18%)
rsc58NP_593010.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24341
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.