DRSC/TRiP Functional Genomics Resources

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Protein Alignment en and Hoxc5

DIOPT Version :10

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_783857.1 Gene:Hoxc5 / 15424 MGIID:96196 Length:222 Species:Mus musculus


Alignment Length:199 Identity:60/199 - (30%)
Similarity:88/199 - (44%) Gaps:24/199 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 SLASPPPASNASTISSTSSVATSSSSSSSGCSSAASSLNSSPSSRLGASGSGVNASSPQPQPIPP 389
            |:..||||.:.|......:....:......||:||     :|...||...:.........|....
Mouse    46 SITFPPPAPSNSLHGVDMAANPRAHPDRPACSAAA-----APGHALGRDEAAPLNPGMYSQKAAR 105

  Fly   390 PSAVSRDSGMESSDDTRSETGSTTTEGGKNEMWPAWVYCTRYSDRPSSGPRYR--RPKQPKDKTN 452
            |:...|   .:||.:.:.|...|....|.::              |.:.|:..  ..|.......
Mouse   106 PALEER---AKSSGEIKEEQAQTGQPAGLSQ--------------PPAPPQIYPWMTKLHMSHET 153

  Fly   453 DEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKSTGSKN 517
            |.||.||:::..|...|::||:.|||||.|||.::::.|.|||.||||||||:|.|.||.:..|:
Mouse   154 DGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWKKDSKMKS 218

  Fly   518 PLAL 521
            ..||
Mouse   219 KEAL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeodomain 455..511 CDD:459649 30/55 (55%)
Engrail_1_C_sig 512..542 CDD:431338 3/10 (30%)
Hoxc5NP_783857.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..141 17/94 (18%)
Antp-type hexapeptide 140..145 0/4 (0%)
Homeodomain 156..212 CDD:459649 30/55 (55%)

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