DRSC/TRiP Functional Genomics Resources

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Protein Alignment en and Hoxa5

DIOPT Version :10

Sequence 1:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_034583.1 Gene:Hoxa5 / 15402 MGIID:96177 Length:270 Species:Mus musculus


Alignment Length:236 Identity:73/236 - (30%)
Similarity:101/236 - (42%) Gaps:61/236 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 GQPAAPTMTQPPLSSSASSLASPPP------ASNASTISSTSSVATSSSSSSSGCSSAASSLNSS 365
            |..|||  .:|..|..|:|..||||      |...|..|.:.....:|..:|||.|:.|.|.:.|
Mouse    76 GASAAP--AEPRYSQPATSTHSPPPDPLPCSAVAPSPGSDSHHGGKNSLGNSSGASANAGSTHIS 138

  Fly   366 PSSRLG---ASGSGVNASSPQ------PQPIPPPSAVSRDSGMESSDDTRSETGSTTTEGGKNEM 421
            ....:|   |:.....|||.|      |.|.||                           .:.::
Mouse   139 SREGVGTASAAEEDAPASSEQAGAQSEPSPAPP---------------------------AQPQI 176

  Fly   422 WPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQ 486
            :| |:.....|.....||             :.||.|||::..|...|::||:.|||||.|||.:
Mouse   177 YP-WMRKLHISHDNIGGP-------------EGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIE 227

  Fly   487 LSSELGLNEAQIKIWFQNKRAKIKKSTGSKNPLALQLMAQG 527
            ::..|.|:|.||||||||:|.|.||....|   ::.:.|.|
Mouse   228 IAHALCLSERQIKIWFQNRRMKWKKDNKLK---SMSMAAAG 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
enNP_523700.2 Homeodomain 455..511 CDD:459649 30/55 (55%)
Engrail_1_C_sig 512..542 CDD:431338 3/16 (19%)
Hoxa5NP_034583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 33/127 (26%)
Antp-type hexapeptide 176..181 2/5 (40%)
Homeodomain 196..252 CDD:459649 30/55 (55%)

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