DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and HDG2

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_172015.1 Gene:HDG2 / 839256 AraportID:AT1G05230 Length:721 Species:Arabidopsis thaliana


Alignment Length:154 Identity:38/154 - (24%)
Similarity:57/154 - (37%) Gaps:24/154 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   425 YSDRPSSG--RSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLK 487
            :.|..:.|  |......|...:.|.:..||.|...:...       |..|:.....:..|:..::
plant    23 HEDNNNEGFLRDDEFDSPNTKSGSENQEGGSGNDQDPLH-------PNKKKRYHRHTQLQIQEME 80

  Fly   488 HEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIP 552
            ..|.|..:..:|:|:|||.||.|...|:|.||||||.::|...               ..|....
plant    81 AFFKECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHH---------------ERHENSH 130

  Fly   553 LTREEEELQELQEAASAAAAKEPC 576
            |..|.|:|:........|.|...|
plant   131 LRAENEKLRNDNLRYREALANASC 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 20/55 (36%)
Engrail_1_C_sig 529..554 CDD:431338 1/24 (4%)
HDG2NP_172015.1 Homeodomain 65..121 CDD:459649 20/55 (36%)
MreC <130..>202 CDD:480808 7/25 (28%)
START_ArGLABRA2_like 246..464 CDD:176884
Blue background indicates that the domain is not in the aligned region.

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