DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and meox2a

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_017206696.1 Gene:meox2a / 556898 ZFINID:ZDB-GENE-080613-1 Length:302 Species:Danio rerio


Alignment Length:297 Identity:71/297 - (23%)
Similarity:106/297 - (35%) Gaps:111/297 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 GGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALSGNIG 304
            ||....||:.|....|.|||||..:||......|                   ||:..:.|.:..
Zfish    57 GGLFGGHQRGLSVSQQQHHHHHHHHHLAQQGGWH-------------------LPQSSSASPSAA 102

  Fly   305 GG----SVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNS 365
            |.    .:||..:|||        :..|       |.|                     ::|:::
Zfish   103 GVRLGLGISGPDSGSS--------DVGP-------GGP---------------------SLCAST 131

  Fly   366 NDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGA-TGASGKSGEDSGTPIVWPAWVYCTRYSDRP 429
                                       |:.|||. :|||...|.|.|...:.||           
Zfish   132 ---------------------------PSLGAGVPSGASCVPGGDFGRHTMSPA----------- 158

  Fly   430 SSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENR 494
                ....|..|:.:.||.:..|.    .|.:.:.     :.::.||||:..|:..|:.||..:.
Zfish   159 ----EAEKRNSKRRSDSSESQDGN----YKSDVSS-----KPRKERTAFTKEQIRELEAEFAHHN 210

  Fly   495 YLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSG 531
            |||..||.:::..|.|.|.|:|:||||:|.|.|:..|
Zfish   211 YLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRVKG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 24/52 (46%)
Engrail_1_C_sig 529..554 CDD:287495 1/3 (33%)
meox2aXP_017206696.1 COG5576 161..267 CDD:227863 32/96 (33%)
Homeobox 191..243 CDD:278475 24/51 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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