DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and gsx2

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001017168.1 Gene:gsx2 / 549922 XenbaseID:XB-GENE-492505 Length:248 Species:Xenopus tropicalis


Alignment Length:324 Identity:81/324 - (25%)
Similarity:112/324 - (34%) Gaps:115/324 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 HHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSGN 321
            |||||.|:.|                          ||                    .|..|..
 Frog    30 HHHHHGQDFL--------------------------LP--------------------ISMPSPT 48

  Fly   322 TNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVD 386
            .....:|:...:|||                  |..:..||           .:|..::|...:.
 Frog    49 VMSVHAPVCPSRKSG------------------SFCVCPIC-----------VASHLHSSRNSIP 84

  Fly   387 LVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAG 451
            |:|...|            :||..          ||.|.|.:||......|..|....|.:....
 Frog    85 LLKGHFP------------NGEAQ----------YCQRVSQQPSPAMVHPAHSPVCSPTYNVTDP 127

  Fly   452 G-----GGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLN 511
            .     ..||.|..:|.:|      ||.|||||.|||..|:.||:.|.||:..||.:::..|.|:
 Frog   128 RRFHCMTMGGAENSQAQNG------KRMRTAFSSTQLLELEREFSSNMYLSRLRRIEIATYLSLS 186

  Fly   512 EAQIKIWFQNKRAKLKK-SSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAASAAAAKE 574
            |.|:||||||:|.|.|| :.|::..........|...|  .|.:.:|:.|    ..||.:..||
 Frog   187 EKQVKIWFQNRRVKHKKENKGSQRNTHGGCKCTGPQGH--YPRSEDEDSL----STASTSEDKE 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 30/55 (55%)
Engrail_1_C_sig 529..554 CDD:431338 4/24 (17%)
gsx2NP_001017168.1 Homeodomain 147..203 CDD:459649 30/55 (55%)

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