DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and En2

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001102684.1 Gene:En2 / 499964 RGDID:1561842 Length:323 Species:Rattus norvegicus


Alignment Length:343 Identity:134/343 - (39%)
Similarity:160/343 - (46%) Gaps:81/343 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 GLGPGGAVHPHQQ-----------LLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADF 289
            |.|.||...|...           .:||....|.|.|             |...|.|||||:.:|
  Rat    24 GGGSGGGSSPSDSDTGRRRALMLPAVLQAPGNHQHPH-------------RITNFFIDNILRPEF 75

  Fly   290 GSR-------LPKIGALSGNIGGGSV--SGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSN 345
            |.|       ....||..|..|.||.  .|.:.|:.:..|......:|..|| .:|.||:.|..:
  Rat    76 GRRKDAGTCCAGAGGARGGEGGAGSTEGGGGADGAEQILGARESRPNPACAP-SAGGPLSGASGD 139

  Fly   346 AAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDS 410
            .||               :....:.|.:........|.|...:.....|.|.|....|..|..||
  Rat   140 PAA---------------DGEGGSKTLSLHGGAKKPGDPGGSLDGALKARGLGGGDLSVSSDSDS 189

  Fly   411 --------GTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGG 467
                    ..|::|||||||||||||||||  ||:|||||...:.                    
  Rat   190 SQASATLGAQPMLWPAWVYCTRYSDRPSSG--PRSRKPKKKNPNK-------------------- 232

  Fly   468 VPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGT 532
              |||||||||:..||.|||.||..||||||:|||.|:.||.|||:||||||||||||:||::|.
  Rat   233 --EDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIKKATGN 295

  Fly   533 KNPLALQLMAQGLYNHST 550
            ||.||:.|||||||||||
  Rat   296 KNTLAVHLMAQGLYNHST 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 39/52 (75%)
Engrail_1_C_sig 529..554 CDD:287495 16/22 (73%)
En2NP_001102684.1 Homeobox 237..290 CDD:278475 39/52 (75%)
Engrail_1_C_sig 292..321 CDD:287495 16/22 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7281
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 199 1.000 Inparanoid score I3716
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002003
OrthoInspector 1 1.000 - - mtm9047
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24341
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1139
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.060

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