DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and CG18599

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_650701.1 Gene:CG18599 / 42191 FlyBaseID:FBgn0038592 Length:475 Species:Drosophila melanogaster


Alignment Length:436 Identity:110/436 - (25%)
Similarity:160/436 - (36%) Gaps:140/436 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 AAGKQLQMAMAAAAVATVPSGQDALAQLTATALGLGPGGAVH--PHQQLLLQRDQVHHHHHMQNH 265
            |.|:....|:||||.|.|           |.:.|.......|  .|.||..|:.|..||||.|.|
  Fly    47 AHGQPHHAALAAAAAAAV-----------AVSAGQSSYQMEHQQQHHQLQQQQQQQQHHHHQQLH 100

  Fly   266 LNNNENLHERALKFSIDNILKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLK 330
            .::.:..|..               ...|..|..:.|      |.||:.||.::.|:| :|..|.
  Fly   101 THHQDGHHPH---------------PPTPTTGNNNNN------SSSSSNSSSHNSNSN-HREQLA 143

  Fly   331 APKKS-------------------GKPLNLA-----QS-----NAAANSSLSFSSSLA----NIC 362
            |...:                   ||...:|     ||     |.|.|.||..::::.    |.|
  Fly   144 AAAATATSHAQLIEAAAAHSSLDVGKSFTIAAILGLQSQRKDYNNAINLSLHDNNNIIGDDNNKC 208

  Fly   363 -----SNSNDSNSTATSSSTTNTSGAPV-----DLV-----------KSPPP-----AAGAGATG 401
                 :|:|::|:...|:|..|.|...|     |.|           :.|.|     ||.|.|.|
  Fly   209 YTSNPNNNNNNNNNGGSNSGNNNSSPSVNNFNCDSVAGNGRYLHGGHQHPHPHQAGFAAVAAAVG 273

  Fly   402 ASGKSGEDSGTPIVWPAWVYC-----TRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGE 461
            |:             |:.:..     .::..:..:..|.:..|.|..:...||.           
  Fly   274 AA-------------PSALQSLQQLHQQHHAQQQATLSFQREKLKSDSHKKSAL----------- 314

  Fly   462 AADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKL 526
                    ::||.||.|:..||..|:.||...:|:....|..|:..|.|.|||:|:||||:|.|.
  Fly   315 --------KNKRVRTIFTPEQLECLEAEFERQQYMVGPERLYLAHTLKLTEAQVKVWFQNRRIKW 371

  Fly   527 KKSSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAASAAAA 572
            :     |:.|.|......|...:.:|.|    .|...|.:.||.||
  Fly   372 R-----KHHLELTQQRLALIRQTQLPGT----SLLGNQVSVSANAA 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 25/55 (45%)
Engrail_1_C_sig 529..554 CDD:431338 5/24 (21%)
CG18599NP_650701.1 Homeodomain 317..373 CDD:459649 25/60 (42%)

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