Protein Alignment inv and abd-A

DIOPT Version :10

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 577
• Identity: 133/577 - (23%)
• Similarity: 200/577 - (34%)
• Gaps: 204/577 - (35%)

  Fly    85 HDLDLEDPASCCSENSVLSVGQEQSEAAQAALSAQAQARQRLLISQIYRPSAFSSTATTVLPPS- 148
            |.|....|.|  |..:|.:.....:.:|.|::||.:.:...  .|.....|..|:|..:...||
  Fly    23 HHLTTTPPNS--SSAAVAAALAAAAASASASVSASSSSNNN--SSNTIAGSNTSNTNNSSSSPSS 83

  Fly   149 ----------EGPPFSPEDLLQ-------LPPSTGT-FQEEFLRKSQLYAEELMKQQMHLMAAAR 195
                      .|...||..|.|       .|.|:.: ||:...:..|.:.....:|.:|......
  Fly    84 SSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQH 148

  Fly   196 VNALTAAAAGKQLQM------AMAAAAVATVPSGQDALAQLTATALGLGPGGAVHPHQQLLLQRD 254
            .:..::.:|..|||.      .:||||||:  .|                    |.||||||..
  Fly   149 HHQYSSLSAALQLQQQQHHISKLAAAAVAS--HG--------------------HAHQQLLLTP- 190

  Fly   255 QVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNS 319
                                                   |..|.........|.|.|::|||...
  Fly   191 ---------------------------------------PSAGNSQAGDSSCSPSPSASGSSSLH 216

  Fly   320 GNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAP 384
            .:.|.| ||               .:|:|::|.|.:||:|          :.|.:::...:|...
  Fly   217 RSLNDN-SP---------------GSASASASASAASSVA----------AAAAAAAAAASSSFA 255

  Fly   385 VDLVKSPP-----PAAGAGATGASGKSG-EDSGTPIVWPAWVYCTRYSDR----------PSSGR 433
            :...|..|     |::..|.:|.:|.:| ||..          |:||:|.          |:|..
  Fly   256 IPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKS----------CSRYTDTVMNSYQSMSVPASAS 310

  Fly   434 SPRA---RKPKKPATSSSAAGGGGGGVEK-GEA--------------ADGGGVPE---------- 470
            :..|   :.....|::.|||..|..||:. |.|              |.|.|:.:
  Fly   311 AQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLT 375

  Fly   471 ----------------------DKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEA 513
                                  .:|.|..::..|...|:.||:.|.|||.:||.:::..|.|.|.
  Fly   376 DWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTER 440

  Fly   514 QIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAASAA 570
            ||||||||:|.||||          :|.|....|... ...|||:|..:.||...:|
  Fly   441 QIKIWFQNRRMKLKK----------ELRAVKEINEQA-RRDREEQEKMKAQETMKSA 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	26/55 (47%)
		Engrail_1_C_sig	529..554	CDD:431338	3/24 (13%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	26/55 (47%)
		Abdominal-A	456..478	CDD:403567	7/22 (32%)