DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and Antp

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:429 Identity:85/429 - (19%)
Similarity:134/429 - (31%) Gaps:175/429 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 QIY-RPSAFSSTATTVLPPSE-----GPPFSPEDLLQLPPSTGTFQEEFLRKSQLYAEEL----- 183
            |:| ||.:.||....|:|.::     |.| ..:...|..||....|::..:..|...::|     
  Fly    81 QVYSRPDSPSSQVGGVMPQAQTNGQLGVP-QQQQQQQQQPSQNQQQQQAQQAPQQLQQQLPQVTQ 144

  Fly   184 -------MKQQMHLMAAARVNALTAAAAGKQLQMAMAAAAVATVPSGQDALAQLTATALGLGPGG 241
                   .:||..:.|:.:   |.||..|..:.....:..:....||....||:|.      |..
  Fly   145 QVTHPQQQQQQPVVYASCK---LQAAVGGLGMVPEGGSPPLVDQMSGHHMNAQMTL------PHH 200

  Fly   242 AVHPHQQL------LLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALS 300
            ..||..||      :....:||.:||       |..::::.              |.:|.:||  
  Fly   201 MGHPQAQLGYTDVGVPDVTEVHQNHH-------NMGMYQQQ--------------SGVPPVGA-- 242

  Fly   301 GNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGK-PLNLAQSNAAANSSLSFSSSLANICSN 364
                                       |.:.....|: |..:.|.:...::              
  Fly   243 ---------------------------PPQGMMHQGQGPPQMHQGHPGQHT-------------- 266

  Fly   365 SNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDRP 429
                                       ||        :...:.:.||.|.....|:         
  Fly   267 ---------------------------PP--------SQNPNSQSSGMPSPLYPWM--------- 287

  Fly   430 SSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENR 494
                                            .:..|...|.||.|..::..|...|:.||:.||
  Fly   288 --------------------------------RSQFGKCQERKRGRQTYTRYQTLELEKEFHFNR 320

  Fly   495 YLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTK 533
            |||.:||.:::..|.|.|.||||||||:|.|.||.:.||
  Fly   321 YLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKTK 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 25/52 (48%)
Engrail_1_C_sig 529..554 CDD:287495 2/5 (40%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 38/293 (13%)
Homeobox 301..354 CDD:395001 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I3555
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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