Protein Alignment inv and cdx1a

DIOPT Version :10

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 177
• Identity: 55/177 - (31%)
• Similarity: 85/177 - (48%)
• Gaps: 26/177 - (14%)

  Fly   391 PPPAAGAGA--TGASGKSGEDSGTPIVW-PAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGG 452
            |.||.|...  ||:|...|...|:...| |.:.:.|.:| .|::|        .:.:...|...|
Zfish    42 PGPALGNDLHHTGSSWSPGFGPGSRDDWPPLYGHGTGHS-LPANG--------VEVSVLPSVDQG 97

  Fly   453 --GGGGVEKGEAAD-----------GGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQL 504
              .|..|::.|..|           ||......:.|..:|..|...|:.||:.:||:|.:|:.:|
Zfish    98 LLSGAPVDREEPQDWMRRSAVPTNPGGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAEL 162

  Fly   505 SGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTI 551
            :|.|.|:|.|:||||||:|||.:|.: .|....:|..:.||.|.:|:
Zfish   163 AGTLNLSERQVKIWFQNRRAKERKMN-KKRLQQVQQSSSGLANTTTV 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	25/55 (45%)
		Engrail_1_C_sig	529..554	CDD:431338	6/23 (26%)
cdx1a	NP_998001.2	Caudal_act	11..123	CDD:461413	21/89 (24%)
		Homeodomain	131..186	CDD:459649	25/54 (46%)