DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and vax1

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_919391.2 Gene:vax1 / 373870 ZFINID:ZDB-GENE-030904-9 Length:317 Species:Danio rerio


Alignment Length:160 Identity:48/160 - (30%)
Similarity:67/160 - (41%) Gaps:41/160 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 AGATGASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGE 461
            :||.....||...||.|      .||.|...|.:.|.......||                    
Zfish    47 SGAVENCEKSRASSGDP------DYCRRILVRDAKGSIREIILPK-------------------- 85

  Fly   462 AADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKL 526
               |..:...||.||:|:..||.||:.||...:|:..:.|.:|:.:|.|:|.|:|:||||:|.|.
Zfish    86 ---GLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQ 147

  Fly   527 KKSSGTKNPL------------ALQLMAQG 544
            ||..|..:.|            .|:|:.||
Zfish   148 KKDQGKDSELRSVVSETAATCSVLRLLEQG 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 25/55 (45%)
Engrail_1_C_sig 529..554 CDD:431338 6/28 (21%)
vax1NP_919391.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 5/14 (36%)
Homeodomain 93..149 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..248
Blue background indicates that the domain is not in the aligned region.

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