DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and PDX1

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_000200.1 Gene:PDX1 / 3651 HGNCID:6107 Length:283 Species:Homo sapiens


Alignment Length:176 Identity:52/176 - (29%)
Similarity:68/176 - (38%) Gaps:45/176 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 PPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSD------------------RPSSGRSPRA 437
            |||....||.||.    |....|.:.|..|  ...:|                  .|.:|..|..
Human    45 PPPHPFPGALGAL----EQGSPPDISPYEV--PPLADDPAVAHLHHHLPAQLALPHPPAGPFPEG 103

  Fly   438 RKP---------------KKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLK 487
            .:|               .|...:.:..|...||....|.      .|:||.|||::..||..|:
Human   104 AEPGVLEEPNRVQLPFPWMKSTKAHAWKGQWAGGAYAAEP------EENKRTRTAYTRAQLLELE 162

  Fly   488 HEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTK 533
            .||..|:|::..||.:|:..|.|.|..|||||||:|.|.||....|
Human   163 KEFLFNKYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 25/52 (48%)
Engrail_1_C_sig 529..554 CDD:287495 1/5 (20%)
PDX1NP_000200.1 Transactivation domain. /evidence=ECO:0000250 13..73 11/33 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..71 11/31 (35%)
Antp-type hexapeptide 118..123 0/4 (0%)
Homeobox 149..202 CDD:278475 25/52 (48%)
Nuclear localization signal. /evidence=ECO:0000250 197..203 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..283 3/8 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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