DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and HOXC8

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens


Alignment Length:333 Identity:70/333 - (21%)
Similarity:107/333 - (32%) Gaps:149/333 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 ALGLGPGGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGA 298
            ||..||||:....|         |..||:|:..::                              
Human    37 ALVYGPGGSAPGFQ---------HASHHVQDFFHH------------------------------ 62

  Fly   299 LSGNIGGGSVSGSSTGSSKNSGNTNGNRSPL----KAPKKSGKPLNLAQSNAAANSSLSFSSSLA 359
                 |...:|.|....:..|.:.:|:.|..    ..|::|   |..||..|   |.:.:..   
Human    63 -----GTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQS---LYGAQQEA---SVVQYPD--- 113

  Fly   360 NICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTR 424
              |.:|.::||:.                             ..|...::|...:::| |:    
Human   114 --CKSSANTNSSE-----------------------------GQGHLNQNSSPSLMFP-WM---- 142

  Fly   425 YSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHE 489
                          :|..|...|.                          |..:|..|...|:.|
Human   143 --------------RPHAPGRRSG--------------------------RQTYSRYQTLELEKE 167

  Fly   490 FNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIPLT 554
            |..|.|||.|||.::|..|||.|.|:||||||:|.|.||.:                |...:|..
Human   168 FLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN----------------NKDKLPGA 216

  Fly   555 REEEELQE 562
            |:||:::|
Human   217 RDEEKVEE 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 27/52 (52%)
Engrail_1_C_sig 529..554 CDD:287495 2/24 (8%)
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 11/113 (10%)
Antp-type hexapeptide 138..143 2/23 (9%)
Homeobox 153..205 CDD:306543 27/51 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 7/35 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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