DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and HOXA1

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_005513.2 Gene:HOXA1 / 3198 HGNCID:5099 Length:335 Species:Homo sapiens


Alignment Length:374 Identity:86/374 - (22%)
Similarity:118/374 - (31%) Gaps:160/374 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 PHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALSGNIGGGSVS 309
            ||          |||||...|..                          |.....|||: |.|.|
Human    64 PH----------HHHHHHHRHPQ--------------------------PATYQTSGNL-GVSYS 91

  Fly   310 GSSTGSSKNSGNTNGNRSP------------------------LKAPKKS-------------GK 337
            .||.|.|..|.|.:...||                        |.:|...             |.
Human    92 HSSCGPSYGSQNFSAPYSPYALNQEADVSGGYPQCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGS 156

  Fly   338 PLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDL-----VKSPPPAAGA 397
            |..:..|....:.||:. ::..|..|..:.|:..|..|..:.|| :|...     ||..||    
Human   157 PQYIHHSYGQEHQSLAL-ATYNNSLSPLHASHQEACRSPASETS-SPAQTFDWMKVKRNPP---- 215

  Fly   398 GATGASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEA 462
             .||..|:.|                 |..:|::                               
Human   216 -KTGKVGEYG-----------------YLGQPNA------------------------------- 231

  Fly   463 ADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLK 527
                       .||.|:..||..|:.||:.|:|||..||.:::..|.|||.|:||||||:|.|.|
Human   232 -----------VRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQK 285

  Fly   528 KSSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAASAAAAKEPC 576
            |..           .:||...|.......:|:.:|..|.:|::    ||
Human   286 KRE-----------KEGLLPISPATPPGNDEKAEESSEKSSSS----PC 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 27/52 (52%)
Engrail_1_C_sig 529..554 CDD:287495 3/24 (13%)
HOXA1NP_005513.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..83 9/54 (17%)
Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022 75..203 30/156 (19%)
COG5576 176..>286 CDD:227863 45/174 (26%)
Antp-type hexapeptide 204..209 0/4 (0%)
Homeobox 233..286 CDD:365835 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..335 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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