DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and hoxb8b

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_571256.1 Gene:hoxb8b / 30420 ZFINID:ZDB-GENE-980526-291 Length:247 Species:Danio rerio


Alignment Length:212 Identity:55/212 - (25%)
Similarity:83/212 - (39%) Gaps:66/212 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 GEDSGTPIVWPAWVYCTRYSDRPSSGRS--PRARKPKKP---ATSSSAAGG--GGGGVEKGE--- 461
            |.::|:     |:.:..::.|....|.|  |.|...:.|   |....|.|.  |..|::|..   
Zfish    42 GHNTGS-----AFQHAAQFPDFYHHGTSSFPHASYQQTPCAVAYPGDATGNILGQDGLQKQSFFG 101

  Fly   462 AADG------------GGVPED----------------------KRPRTAFSGTQLARLKHEFNE 492
            |.|.            .|:.:|                      :|.|..:|..|...|:.||..
Zfish   102 APDSDFTQFGDCNLKVSGIRDDLESAEPCTAQLFPWMRPQATGRRRGRQTYSRYQTLELEKEFLF 166

  Fly   493 NRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIPLTR-E 556
            |.|||.|||.::|..|.|.|.|:||||||:|.|.||.                :|....|.:: |
Zfish   167 NPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKE----------------HNKDKFPSSKAE 215

  Fly   557 EEELQELQEAASAAAAK 573
            :||::..::..|..:.|
Zfish   216 QEEIERERQEGSQVSEK 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 26/52 (50%)
Engrail_1_C_sig 529..554 CDD:287495 2/24 (8%)
hoxb8bNP_571256.1 Antp-type hexapeptide 134..139 0/4 (0%)
Homeobox 149..201 CDD:278475 26/51 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..247 9/48 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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