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Protein Alignment inv and hoxc4a
DIOPT Version :9
Sequence 1: | NP_523699.3 |
Gene: | inv / 36239 |
FlyBaseID: | FBgn0001269 |
Length: | 576 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571197.1 |
Gene: | hoxc4a / 30345 |
ZFINID: | ZDB-GENE-990415-112 |
Length: | 268 |
Species: | Danio rerio |
Alignment Length: | 167 |
Identity: | 53/167 - (31%) |
Similarity: | 78/167 - (46%) |
Gaps: | 39/167 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 391 PPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKP------KK--PATSS 447
|||...:.||.::..|..:..|| :.|:|..| |::| || .:|.:
Zfish 97 PPPLPLSPATPSAASSACNQATP-------------EHPNSSAS--AKQPVVYPWMKKIHVSTVN 146
Fly 448 SAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNE 512
|:..|. |.||.|||::..|:..|:.||:.|||||.:||.:::..|.|:|
Zfish 147 SSYNGA----------------EPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSE 195
Fly 513 AQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHS 549
.||||||||:|.|.||.....|.......:.|:.:.|
Zfish 196 RQIKIWFQNRRMKWKKDHRLPNTKVRSSSSTGISSGS 232
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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