DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and hoxb4a

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_571193.1 Gene:hoxb4a / 30340 ZFINID:ZDB-GENE-990415-105 Length:246 Species:Danio rerio


Alignment Length:165 Identity:52/165 - (31%)
Similarity:74/165 - (44%) Gaps:35/165 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   370 STATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRS 434
            :||.|:.....|.....:..|||||.|...|..:..:......|:|:| |:              
Zfish    85 TTALSTPLPEPSHHCDSVTPSPPPACGQTPTSQNTSTVSSRKDPVVYP-WM-------------- 134

  Fly   435 PRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEK 499
               :|......|.:.:||                 |.||.|||::..|:..|:.||:.|||||.:
Zfish   135 ---KKVHVNIVSPNYSGG-----------------EPKRSRTAYTRQQVLELEKEFHYNRYLTRR 179

  Fly   500 RRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKN 534
            ||.:::..|.|:|.||||||||:|.|.||.....|
Zfish   180 RRVEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPN 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 27/52 (52%)
Engrail_1_C_sig 529..554 CDD:287495 1/6 (17%)
hoxb4aNP_571193.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..125 11/39 (28%)
Antp-type hexapeptide 130..135 3/22 (14%)
Homeobox 154..207 CDD:278475 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..246 1/5 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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