Protein Alignment inv and Hoxd4

DIOPT Version :10

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 188
• Identity: 59/188 - (31%)
• Similarity: 82/188 - (43%)
• Gaps: 40/188 - (21%)

  Fly   383 APVDLVKSPPPAAGAGATGASGKSGEDS---GTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPA 444
            ||.:...:||||...||...|..:|...   ||.:..||.||             |..:|....:
  Rat    91 APGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVY-------------PWMKKVHVNS 142

  Fly   445 TSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELG 509
            .:.:..||                 |.||.|||::..|:..|:.||:.|||||.:||.:::..|.
  Rat   143 VNPNYTGG-----------------EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 190

  Fly   510 LNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAA 567
            |:|.||||||||:|.|.||.....|       .:|..:.|:...:......|.||..|
  Rat   191 LSERQIKIWFQNRRMKWKKDHKLPN-------TKGRSSSSSSSCSSSAAPSQHLQPMA 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	29/55 (53%)
		Engrail_1_C_sig	529..554	CDD:431338	3/24 (13%)
Hoxd4	NP_001099355.1	Homeodomain	153..209	CDD:459649	29/55 (53%)