Protein Alignment inv and Hoxd4

DIOPT Version :9

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_001099355.1
• Gene: Hoxd4 / 288153
• RGDID: 1309690
• Length: 251
• Species: Rattus norvegicus
• Alignment Length: 188
• Identity: 59/188 - (31%)
• Similarity: 82/188 - (43%)
• Gaps: 40/188 - (21%)

  Fly   383 APVDLVKSPPPAAGAGATGASGKSGEDS---GTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPA 444
            ||.:...:||||...||...|..:|...   ||.:..||.||             |..:|....:
  Rat    91 APGEPCPAPPPAPLPGARACSQPTGPKQPPPGTALKQPAVVY-------------PWMKKVHVNS 142

  Fly   445 TSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELG 509
            .:.:..||                 |.||.|||::..|:..|:.||:.|||||.:||.:::..|.
  Rat   143 VNPNYTGG-----------------EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 190

  Fly   510 LNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIPLTREEEELQELQEAA 567
            |:|.||||||||:|.|.||.....|       .:|..:.|:...:......|.||..|
  Rat   191 LSERQIKIWFQNRRMKWKKDHKLPN-------TKGRSSSSSSSCSSSAAPSQHLQPMA 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeobox	474..527	CDD:278475	27/52 (52%)
		Engrail_1_C_sig	529..554	CDD:287495	3/24 (13%)
Hoxd4	NP_001099355.1	Homeobox	155..209	CDD:395001	27/53 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000