DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and Gbx1

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_056554.1 Gene:Gbx1 / 231044 MGIID:95667 Length:418 Species:Mus musculus


Alignment Length:330 Identity:88/330 - (26%)
Similarity:124/330 - (37%) Gaps:90/330 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 GALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPL-KAPKKSG-------------KPLNLAQSNAA 347
            |:......||...|.|.|||...|......|.: ..|.:||             :||.|.|:.|.
Mouse    58 GSAMQRAAGGGAPGGSGGSSGGPGAAFSIDSLIGPPPPRSGHLLYTGYPMFMPYRPLVLPQALAP 122

  Fly   348 A---------NSSLSFSSSLAN-ICSNSNDSNSTATSSSTTNTSGA-PVDLVKSPPPAAGAGATG 401
            |         ....||:..|:| .|:....:..:..:.:|...|.| |.|....||..|.|.|:.
Mouse   123 APLPAGLPPLAPLASFAGRLSNTFCAGLGQAVPSMVALTTALPSFAEPPDAYYGPPELAAAAAST 187

  Fly   402 ASGKSGEDSG--------------------TPIVWPAWVYCTRYSDRPSSGR--SPRARKPKKPA 444
            ||..:.|.:.                    .|...|...:...:...|:.|:  |....|.:.||
Mouse   188 ASRSNPEPAARRTDGALDAEELLPAREKVTEPPPPPPPHFSETFPSLPAEGKVYSSDEEKLEPPA 252

  Fly   445 ---------------------TSSSAAGGG-------------GGGVEKG-EAADGGGVP--EDK 472
                                 ..|||.|.|             |.|.|:| ..|.|...|  :.:
Mouse   253 GDPAGSEQEEEGSGGDSEDSFLDSSAGGPGALLGPKPKLKGSPGTGAEEGTPVATGVTTPGGKSR 317

  Fly   473 RPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK------SSG 531
            |.||||:..||..|:.||:..:||:...|.|::..|.|:|.|:||||||:|||.|:      ||.
Mouse   318 RRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVSSR 382

  Fly   532 TKNPL 536
            :..|:
Mouse   383 SGEPV 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 26/52 (50%)
Engrail_1_C_sig 529..554 CDD:287495 3/8 (38%)
Gbx1NP_056554.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..90 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..320 21/105 (20%)
Homeobox 319..372 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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