DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and Nkx6-1

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_659204.1 Gene:Nkx6-1 / 18096 MGIID:1206039 Length:365 Species:Mus musculus


Alignment Length:332 Identity:83/332 - (25%)
Similarity:129/332 - (38%) Gaps:88/332 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 GGSVSGSSTGSSKNSGNTNGNRSP--LKAPKKSG------------------------KPLNLAQ 343
            |...|.||:.||.:.....|:.:|  ||.|...|                        :|.....
Mouse    46 GPPSSSSSSSSSSSPSPPLGSHNPGGLKPPAAGGLSSLGSPPQQLSAATPHGINDILSRPSMPVA 110

  Fly   344 SNAA---ANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVK--------SPPP---- 393
            |.||   |:.|.|.|||.::..:.|..:.:.|.:::....:.:|..|:.        ||||    
Mouse   111 SGAALPSASPSGSSSSSSSSASATSASAAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPG 175

  Fly   394 ------AAGAGATGASGKS-GEDSG-TPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAA 450
                  ||...|.|...|. .|..| |||.||..:            :||    |.:.|..:...
Mouse   176 LYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVM------------QSP----PWRDARLACTP 224

  Fly   451 GGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQI 515
            ..|...::|    ||    :.|..|..|||.|:..|:..|.:.:||....|.:|:..||:.|:|:
Mouse   225 HQGSILLDK----DG----KRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQV 281

  Fly   516 KIWFQNKRAKLKKSSGTKNPLALQLM------AQGL---------YNHSTIPLTREEEELQELQE 565
            |:||||:|.|.:|....:...|.:..      .:|.         ||....|.:.:|:..|.|::
Mouse   282 KVWFQNRRTKWRKKHAAEMATAKKKQDSETERLKGTSENEEDDDDYNKPLDPNSDDEKITQLLKK 346

  Fly   566 AASAAAA 572
            ..|:..:
Mouse   347 HKSSGGS 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 23/55 (42%)
Engrail_1_C_sig 529..554 CDD:431338 5/39 (13%)
Nkx6-1NP_659204.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..136 22/89 (25%)
Repressor domain. /evidence=ECO:0000250 102..269 49/190 (26%)
Homeodomain 236..294 CDD:459649 23/57 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..365 9/59 (15%)
Involved in DNA-binding. /evidence=ECO:0000250 307..365 8/47 (17%)

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