DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and ceh-23

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_498700.1 Gene:ceh-23 / 176096 WormBaseID:WBGene00000446 Length:305 Species:Caenorhabditis elegans


Alignment Length:267 Identity:63/267 - (23%)
Similarity:103/267 - (38%) Gaps:58/267 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 SNAAANSSLSFSSSL--ANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKS 406
            |....:.:|.||:::  .|:...|..:||....:...........|:::.|.|..|.|......:
 Worm    45 STGMLSPNLPFSATIPRVNLFPPSQPANSLILPTIPAQPFIPNPSLLQANPSAVEALANALFATT 109

  Fly   407 GEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKK---------------PATSS--------- 447
            ...:..|.. ||....|.....||:| ||..|:..:               |.||.         
 Worm   110 SRRASCPEP-PASSQATVTLQVPSTG-SPERRRYSETNMEVLLREQLAQLMPPTSQLPGMPGCYY 172

  Fly   448 ---SAAGGGG--GGVEKGEAADGGGVP-------------EDKRPRTAFSGTQLARLKHEFNENR 494
               .|||..|  |.:   :||..|.||             ..::.||.:..||..:|:..|....
 Worm   173 QHVPAAGTSGIQGSL---DAALMGAVPLAMNSMAHSRRAANHRKARTIYGTTQTQQLEDMFKGQM 234

  Fly   495 YLTEKRRQQLSGELGLNEAQIKIWFQNKRAK-LKKSSGTKNPLALQLMAQGLYNHSTIPLTREEE 558
            |:....|:.|:..|||:.:|::|||||:|:| .:|....:....|:..::        .:.::||
 Worm   235 YVVGAERENLAQRLGLSPSQVRIWFQNRRSKHRRKQQEEQQSTTLEEKSE--------EIGKDEE 291

  Fly   559 ELQELQE 565
            |..|..|
 Worm   292 EDDEEDE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 20/56 (36%)
Engrail_1_C_sig 529..554 CDD:431338 1/24 (4%)
ceh-23NP_498700.1 Homeodomain 212..268 CDD:459649 20/55 (36%)

Return to query results.
Submit another query.