Protein Alignment inv and lin-39

DIOPT Version :10

• Sequence 1: NP_523699.3
• Gene: inv / 36239
• FlyBaseID: FBgn0001269
• Length: 576
• Species: Drosophila melanogaster
• Sequence 2: NP_001021164.1
• Gene: lin-39 / 176068
• WormBaseID: WBGene00003024
• Length: 253
• Species: Caenorhabditis elegans
• Alignment Length: 245
• Identity: 67/245 - (27%)
• Similarity: 114/245 - (46%)
• Gaps: 32/245 - (13%)

  Fly   322 TNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSNST------ATSSSTTNT 380
            |:.:.|...||:.:. |.:.:.|:::::||.|.||..|:...:|::.:||      ..|::.:..
 Worm     3 TSTSPSSTDAPRATA-PESSSSSSSSSSSSSSTSSVGASGIPSSSELSSTIGYDPMTASAALSAH 66

  Fly   381 SGAPVDLVKSPPPAA-GAGATGASGKS----GEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKP 440
            .|:..|...|...|: .|.:.|..|..    |:.|   :.:...|..|.:..:...|.....:..
 Worm    67 FGSYYDPTSSSQIASYFASSQGLGGPQYPILGDQS---LCYNPSVTSTHHDWKHLEGDDDDDKDD 128

  Fly   441 KKPATSSSAAGGGGGGVEKGEA-----------ADGGGVPEDKRPRTAFSGTQLARLKHEFNENR 494
            .|...|     |....::|...           :..||...:||.|||::..|:..|:.||:.::
 Worm   129 DKKGIS-----GDDDDMDKNSGGAVYPWMTRVHSTTGGSRGEKRQRTAYTRNQVLELEKEFHTHK 188

  Fly   495 YLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQG 544
            |||.|||.:::..|.|.|.|:||||||:|.|.||.:..| |:...:|..|
 Worm   189 YLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKENKDK-PMTPPMMPFG 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
inv	NP_523699.3	Homeodomain	472..528	CDD:459649	27/55 (49%)
		Engrail_1_C_sig	529..554	CDD:431338	4/16 (25%)
lin-39	NP_001021164.1	Homeodomain	166..222	CDD:459649	27/55 (49%)