DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and GSX2

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_573574.2 Gene:GSX2 / 170825 HGNCID:24959 Length:304 Species:Homo sapiens


Alignment Length:286 Identity:74/286 - (25%)
Similarity:116/286 - (40%) Gaps:61/286 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 PLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPP 392
            ||..|    .||.::.|.....|..|.:..:..:|..|:..:|..:..:.:..:||.|      .
Human    34 PLGMP----PPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSRGSVGAGSGGAGAGV------T 88

  Fly   393 PAAGAGATGASGK----SGEDSGTPIVWPAWVYCTRYSDRPSSGRSPR----ARKPKKPATSSSA 449
            .|.|:|..||:|.    .|:.|..|   ....:|.|.:........|:    ..:|::|.::::|
Human    89 GAGGSGVAGAAGALPLLKGQFSSAP---GDAQFCPRVNHAHHHHHPPQHHHHHHQPQQPGSAAAA 150

  Fly   450 AGGGGGGVEKGE------------------------------AADGGGVPEDKRPRTAFSGTQLA 484
            |...........                              .:|...||..||.||||:.|||.
Human   151 AAAAAAAAAAAALGHPQHHAPVCTATTYNVADPRRFHCLTMGGSDASQVPNGKRMRTAFTSTQLL 215

  Fly   485 RLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK-SSGTKNPLALQLMAQGLYNH 548
            .|:.||:.|.||:..||.:::..|.|:|.|:||||||:|.|.|| ..||:..........|    
Human   216 ELEREFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGTQRNSHAGCKCVG---- 276

  Fly   549 STIPLTREEEELQELQEAASAAAAKE 574
            |.:...|.|:|     ::.|.|:|.:
Human   277 SQVHYARSEDE-----DSLSPASAND 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 27/52 (52%)
Engrail_1_C_sig 529..554 CDD:287495 4/24 (17%)
GSX2NP_573574.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..151 5/34 (15%)
Homeobox 206..258 CDD:306543 27/51 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..304 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.