DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and Hoxa5

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_034583.1 Gene:Hoxa5 / 15402 MGIID:96177 Length:270 Species:Mus musculus


Alignment Length:326 Identity:84/326 - (25%)
Similarity:119/326 - (36%) Gaps:88/326 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 GLGPGGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGALS 300
            |..|.|   |..||          |:..:|.:.:|...:.|                    ...|
Mouse    11 GRYPNG---PDYQL----------HNYGDHSSVSEQFRDSA--------------------SMHS 42

  Fly   301 GNIGGGSVSGS--STGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICS 363
            |..|.| .:|.  |.|.|.:....:|.|:...|...|..|.....|..|.::.......|.  ||
Mouse    43 GRYGYG-YNGMDLSVGRSGSGHFGSGERARSYAAGASAAPAEPRYSQPATSTHSPPPDPLP--CS 104

  Fly   364 NSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTRYSDR 428
                  :.|.|..:.:..|....|..|...:|.||:|..|.:.|..:.:          ....|.
Mouse   105 ------AVAPSPGSDSHHGGKNSLGNSSGASANAGSTHISSREGVGTAS----------AAEEDA 153

  Fly   429 PSSGRSPRARKPKKPA---------------TSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAF 478
            |:|.....|:....||               .|....||                ||.||.|||:
Mouse   154 PASSEQAGAQSEPSPAPPAQPQIYPWMRKLHISHDNIGG----------------PEGKRARTAY 202

  Fly   479 SGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQ 543
            :..|...|:.||:.|||||.:||.:::..|.|:|.||||||||:|.|.||.:..|   ::.:.|.
Mouse   203 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLK---SMSMAAA 264

  Fly   544 G 544
            |
Mouse   265 G 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 29/55 (53%)
Engrail_1_C_sig 529..554 CDD:431338 3/16 (19%)
Hoxa5NP_034583.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 24/117 (21%)
Antp-type hexapeptide 176..181 0/4 (0%)
Homeodomain 196..252 CDD:459649 29/55 (53%)

Return to query results.
Submit another query.