DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and gbx1

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_777286.1 Gene:gbx1 / 142985 ZFINID:ZDB-GENE-020117-2 Length:316 Species:Danio rerio


Alignment Length:306 Identity:83/306 - (27%)
Similarity:120/306 - (39%) Gaps:88/306 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 FSIDNILKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQ 343
            ||||:::    |:..|:.|.|           ..||            .|:..|.   :||.:.|
Zfish    11 FSIDSLI----GTPQPRPGHL-----------LYTG------------YPMFMPY---RPLMIPQ 45

  Fly   344 SNAAANSSL-----------SFSSSLAN-ICSNSNDSNSTATSSSTTNTS-GAPVDLV----KSP 391
              |.::|||           ||:..|.| .|:.......:..:.:||..| ..|.|..    :.|
Zfish    46 --ALSHSSLPSGIPPLAPLASFAGRLTNTFCAGLGQGMPSMVALTTTLPSFSDPPDSFYPPQEMP 108

  Fly   392 PPAAGAGATGASGK----------------------SGE------DSGTPIVWPAWVYCTRYSDR 428
            .|..||..||.:.:                      :||      |.....:..|...|   |||
Zfish   109 GPRLGADGTGMNRQESPHDELKGSELLNFTETFQAVAGETKLYSSDDEKLDLKAAEAAC---SDR 170

  Fly   429 PSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAAD----GGGVPEDKRPRTAFSGTQLARLKHE 489
            ..|.............|.:||:   ..|..||.:.|    ||...:.:|.||||:..||..|:.|
Zfish   171 EDSSADSENESFSDGNTCASAS---QKGKLKGGSQDALPPGGSAGKSRRRRTAFTSEQLLELEKE 232

  Fly   490 FNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK-SSGTKN 534
            |:..:||:...|.|::..|.|:|.|:||||||:|||.|: .:|..|
Zfish   233 FHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVN 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 26/52 (50%)
Engrail_1_C_sig 529..554 CDD:287495 2/6 (33%)
gbx1NP_777286.1 Homeobox 217..270 CDD:278475 26/52 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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