DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment inv and gbx2.1

DIOPT Version :9

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_002932046.1 Gene:gbx2.1 / 100485559 XenbaseID:XB-GENE-855771 Length:340 Species:Xenopus tropicalis


Alignment Length:442 Identity:96/442 - (21%)
Similarity:148/442 - (33%) Gaps:162/442 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 AALSAQAQARQRLLISQIYRPSAFSSTATTVLPPSEGP------------PFSPEDLLQLPPSTG 166
            ||........||.|.|.    :|||..:....||...|            |:.|..|...||...
 Frog     3 AAFQPPLMMMQRPLGSS----TAFSIDSLIGSPPQPSPGHFVYTGYPMFMPYRPVVLPPPPPPPP 63

  Fly   167 TFQEEFLRKSQLYAEELMKQQMHLMAAARVNALTAAAAGKQLQMAMAAAAVATVPSGQDALAQLT 231
            :..:..|:.:...|     ...|.:.:......::.|.|    ||:.:..:||:|.|..|.||  
 Frog    64 SLSQATLQPTLPSA-----HPHHQIPSLPSGFCSSLAQG----MALTSTLMATLPGGFSASAQ-- 117

  Fly   232 ATALGLGPGGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKI 296
                          ||                          |.|.||...::.           
 Frog   118 --------------HQ--------------------------EAARKFGAQSLQ----------- 131

  Fly   297 GALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANI 361
            ||...:.||            .|...:||::.:   .|.|             :.|.||:|..::
 Frog   132 GAFEKSDGG------------QSDGEDGNKTYI---TKEG-------------TLLPFSASEVSL 168

  Fly   362 CSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATG--ASGKSGEDS---GTPIVWPA--W 419
                                        .|....|...:|  |.||..|||   .:.:.:.:  .
 Frog   169 ----------------------------GPVRGQGKEESGKEAEGKGKEDSYLMDSDLDYSSDDN 205

  Fly   420 VYC-TRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQL 483
            :.| |.:.:..:...||....|...:.:||..                   :::|.||||:..||
 Frog   206 ISCQTAHKEDDTPEESPPNSNPSNNSNTSSTG-------------------KNRRRRTAFTSEQL 251

  Fly   484 ARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKK-SSGTKN 534
            ..|:.||:..:||:...|.|::..|.|:|.|:||||||:|||.|: .:|..|
 Frog   252 LELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNAN 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeobox 474..527 CDD:278475 26/52 (50%)
Engrail_1_C_sig 529..554 CDD:287495 2/6 (33%)
gbx2.1XP_002932046.1 Homeobox 242..296 CDD:365835 26/53 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.