DRSC/TRiP Functional Genomics Resources

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Protein Alignment inv and ventx1

DIOPT Version :10

Sequence 1:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001107707.1 Gene:ventx1 / 100101668 XenbaseID:XB-GENE-920501 Length:277 Species:Xenopus tropicalis


Alignment Length:230 Identity:55/230 - (23%)
Similarity:90/230 - (39%) Gaps:74/230 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 PLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDSNSTATSSSTTNTSGAPVDLVKSPP 392
            || ||.|..|.:...:.......:.||.|||                       |...|.:....
 Frog    38 PL-APTKYAKEIPRRKDGQEQGDATSFQSSL-----------------------GKHGDKLHYSS 78

  Fly   393 PAAGA-----GATGASGKSGEDSGTPIVWPAWVYCTRYSDRPSSGRSPRARKPKKPATSSSAAGG 452
            |::.|     |::.....:|.:..:...:|:.|..::.::....|:||::               
 Frog    79 PSSAALHRNWGSSDEFSSAGSEDDSTDGFPSPVRNSQETETDCRGKSPKS--------------- 128

  Fly   453 GGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHEFNENRYLTEKRRQQLSGELGLNEAQIKI 517
                            ...:|.||||: .|::||:..||:.|||....|::|:..|.|:|.|:|.
 Frog   129 ----------------DLQRRLRTAFT-PQISRLEQAFNKQRYLGASERKKLATSLRLSEIQVKT 176

  Fly   518 WFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIP 552
            ||||:|.|||:          |:..|   .||.:|
 Frog   177 WFQNRRMKLKR----------QIQDQ---QHSMVP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
invNP_523699.3 Homeodomain 472..528 CDD:459649 27/55 (49%)
Engrail_1_C_sig 529..554 CDD:431338 5/24 (21%)
ventx1NP_001107707.1 Homeodomain 132..187 CDD:459649 27/55 (49%)

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