DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment E(Pc) and epc1a

DIOPT Version :9

Sequence 1:NP_001260897.1 Gene:E(Pc) / 36238 FlyBaseID:FBgn0000581 Length:2097 Species:Drosophila melanogaster
Sequence 2:XP_695062.2 Gene:epc1a / 566686 ZFINID:ZDB-GENE-070629-5 Length:796 Species:Danio rerio


Alignment Length:927 Identity:301/927 - (32%)
Similarity:446/927 - (48%) Gaps:212/927 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKLSFRARHLDPSKQMPIYLAEELPDLPEYSAINRAVPQMPSGMEKEEESEHHLQRAICT---- 61
            |||||||||.||..|.:||:..|:||||.||::|||||||||:||||:||.||||||||..    
Zfish     1 MSKLSFRARALDALKPLPIFRCEDLPDLHEYASINRAVPQMPTGMEKDEELEHHLQRAISAQQVY 65

  Fly    62 -----GLIIPTPEVLQTDQPFYDAYYPPDYKMPRQMIHMQPLGLDTEVPDYDMDSADEDWLSQ-Q 120
                 .::||.||. :::..:||:.||.|:|||:|:||:||..||||.||||:|..||.:::: :
Zfish    66 GEKRDNMVIPVPEA-ESNIAYYDSLYPGDFKMPKQLIHIQPFSLDTEQPDYDLDLEDEVFVNKLK 129

  Fly   121 QRLELTELKFEQMMDRLEKSSGQTVVTLNEAKSLLNQDDETSISVYDYWLNKR-LKMQHPLILTV 184
            ::||:..|:||:|:|||||.|||.:|||.|||.||.:|||....|::||..|| |.....||..:
Zfish   130 KKLEVEALQFEEMIDRLEKGSGQQLVTLQEAKLLLKEDDELIREVFEYWSRKRKLSKYGSLIPNI 194

  Fly   185 KTESRPGASSNNPYLAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLQRATTILEMVRRREETKR 249
            :.|.|.|:|:|:||:||||||||||||||||||||||||||||||||.||.|||||:::||::||
Zfish   195 RQEKRDGSSTNDPYVAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLSRAVTILEMIKKREKSKR 259

  Fly   250 DHLKMTVNIFEKRVEMRDFNGAVYSELNSQYKNTRPAYNPLYTNQYSQGAAAVGTAGAILAALPT 314
            :.|.:|:.|.|||..:.||...|.:|..:..|       |:|                   .:| 
Zfish   260 ELLHLTLEIVEKRNTVPDFGSEVMAEALAMAK-------PVY-------------------KIP- 297

  Fly   315 GLLPGGAGAAGNANVFGSASQYLNSSNLTMDAISGSGNGNSSRKEKRPYKKRKHKLPRDKQQHQQ 379
             ::|           |.:::||.:..::..             ||.:. |..|.::.|.|:::: 
Zfish   298 -IIP-----------FSNSTQYRHQDHIDF-------------KEYKT-KPEKPEVVRTKRKYE- 335

  Fly   380 QQTQQHQQQQYLPASGGAGVSPAHHLPHHLHHLSRQQSASPAANDSIADSEEEDYFGAGAQNGNK 444
                  ::.:.||.|     :|.|..|...:.....|...|:::|     |......:|:     
Zfish   336 ------KKPKLLPLS-----APLHTGPSLFNPKDLNQYDFPSSDD-----EPFSQIHSGS----- 379

  Fly   445 LGSESEEET----PFAFRRRSSCVYLPTR-QRDGRYPWDSADEDMAPSGACSDAKYRYTLTSLNY 504
              ||:|||.    .|||||::.|||...| .:.|.:|| |.:.|    |...:.::||:||:|..
Zfish   380 --SEAEEENEPDGAFAFRRKAGCVYHAARLDQSGDWPW-SGEAD----GRSCNPRFRYSLTTLTI 437

  Fly   505 PRPRCIGFARRRLGRGGRILLDRATTNFDDFWSQLDYTVMESVTVNKCRDKIKQRDPDQLCKPSS 569
            || ||:|.||||:|||||..||||.::.:..:..||                ...:|| ...|:|
Zfish   438 PR-RCVGLARRRVGRGGRFHLDRAYSDLNGLFQSLD----------------TDSEPD-FSFPAS 484

  Fly   570 PPTVVDLVPAGKPVDGEHPVPELIKEEPS----SDTEKPVAATES--GRESKERELEEKFENDVD 628
            |   :......:.|...|....|.....|    ||..:.:.:..|  .|..|.|.|..  ::...
Zfish   485 P---LHTESTSQSVTSTHTSSTLQTSSSSHTAYSDLRQVLRSIRSCRWRHFKPRTLTS--QSGTG 544

  Fly   629 DEFVASDDENVSRLGIYSSAVTL-------PQSCA----DLRQKRRRLR-RKKQQLRELNAAKRL 681
            |.......:.:.|.|......|:       |.:.|    ..:|.:.:|. .:||||.::......
Zfish   545 DAPTRRAIKGLIRGGAGPGGSTMGRTAGMGPPAVAFTAEQYQQHQEQLALMQKQQLEQIQHQANN 609

  Fly   682 KRSSEAVA--TAEDVQLEDEDTKPDLRPLPRAYLQRLALILGQK---LKVEED------------ 729
            ..||:::.  |.:.|.               |.....||:...:   |||:||            
Zfish   610 SASSQSLVSKTLDSVS---------------AQFAASALMTSDQLLTLKVKEDGAGGGVNGVIQA 659

  Fly   730 ----DNTEVSENVAPELLEMNDPEQLQPPRANHQQHHRSNHNNNN-------NTVLNNNNSSSSN 783
                ....:|...:..|:.........||.      ..|:.:|:|       :|.:.|:.:|::|
Zfish   660 SGVYKGLSISSTSSSALITSQSAPTAAPPT------FLSSSSNSNTSSTHSVHTPIGNHGNSTAN 718

  Fly   784 VMNKDVSISEKINVIKQEAEELVGGKCEDQPVASTSAAAAAARAAEAA------AAAEAASSTTT 842
                            ..::.|:|.... ..|.:.|.|:..||....:      ||.:.|:|...
Zfish   719 ----------------SASQVLIGNNLR-LSVTAPSIASLNARHLPRSLSNVPPAALKLAASNCQ 766

  Fly   843 LAAPNPGPSLEEVAKTI 859
            |...|.|...|:..:::
Zfish   767 LPKANAGEKHEQEKQSL 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E(Pc)NP_001260897.1 EPL1 7..139 CDD:287484 75/141 (53%)
epc1aXP_695062.2 EPL1 7..148 CDD:287484 75/141 (53%)
E_Pc_C 579..796 CDD:284226 45/243 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592428
Domainoid 1 1.000 160 1.000 Domainoid score I4017
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 419 1.000 Inparanoid score I1778
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001287
OrthoInspector 1 1.000 - - otm24238
orthoMCL 1 0.900 - - OOG6_102490
Panther 1 1.100 - - O PTHR14898
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1679
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.890

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