DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prip and NIP4;2

DIOPT Version :9

Sequence 1:NP_001246266.1 Gene:Prip / 36237 FlyBaseID:FBgn0033635 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001330234.1 Gene:NIP4;2 / 833760 AraportID:AT5G37820 Length:319 Species:Arabidopsis thaliana


Alignment Length:247 Identity:72/247 - (29%)
Similarity:112/247 - (45%) Gaps:17/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LWQALIGEFLGNLILNFFACG--ACTQIEDGTFK----ALAFGLAIFMAITIVGHLSGGHVNPAV 78
            |.|.||.|.:|...:.|..||  ....:..||..    .:.:||.:.:.|...||:||.|.||||
plant    77 LTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAV 141

  Fly    79 TAGMLVAGRISLIRAFFYVVFQCLGAIAGTAAVKILIDQDYYNGLGHTSLAPNITELQGLGIEFF 143
            |....|..|....:...|:..|..|::..:..::::.:.......|.|   |..:..|.|..|..
plant   142 TVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTT---PTDSSGQALVAEII 203

  Fly   144 LGLLLVLVVFGACDPHKPDSRYT---APLAIGMAVTLGHLGTIRYTGASMNPARTVGTAFATDIW 205
            :..||:.|:.|..    .|||.|   |.:|:||.:.|........:||||||||::|.|.....:
plant   204 ISFLLMFVISGVA----TDSRATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRY 264

  Fly   206 ASHWVYWVGPVLGGVAAALLYTQV-LEAKPVPKVNEASEKYRTHADEREGCK 256
            ...|||.|||.:|..|...:|..: ...||:.::.:::...|:.|.:....|
plant   265 KGIWVYIVGPFVGIFAGGFVYNFMRFTDKPLRELTKSASFLRSVAQKDNASK 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PripNP_001246266.1 MIP 12..226 CDD:294134 66/214 (31%)
NIP4;2NP_001330234.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0580
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53729
OrthoDB 1 1.010 - - D1152704at2759
OrthoFinder 1 1.000 - - FOG0000054
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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