DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prip and NIP1;2

DIOPT Version :10

Sequence 1:NP_001246266.1 Gene:Prip / 36237 FlyBaseID:FBgn0033635 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_193626.1 Gene:NIP1;2 / 827626 AraportID:AT4G18910 Length:294 Species:Arabidopsis thaliana


Alignment Length:248 Identity:75/248 - (30%)
Similarity:120/248 - (48%) Gaps:12/248 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NELKSKELRLWQALIGEFLGNLILNFFACGAC---TQIEDGTFK---ALAFGLAIFMAITIVGHL 69
            :.|.|..:...|.|:.|.||...|.|..|.|.   ||.:.....   |:.:||.:.:.:..:||:
plant    41 DSLLSISVPFLQKLMAEVLGTYFLIFAGCAAVAVNTQHDKAVTLPGIAIVWGLTVMVLVYSLGHI 105

  Fly    70 SGGHVNPAVTAGMLVAGRISLIRAFFYVVFQCLGAIAGTAAVKIL--IDQDYYNGLGHTSLA--P 130
            ||.|.|||||......||..|.:...||:.|.:|:....|.:::|  :|||..:|.....:.  |
plant   106 SGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVGTLP 170

  Fly   131 NITELQGLGIEFFLGLLLVLVVFGACDPHKPDSRYTAPLAIGMAVTLGHLGTIRYTGASMNPART 195
            :.:.||...|||.:...|:.|:.|....::.... .|.||:|..|.|..:.....:||||||.|:
plant   171 SGSNLQSFVIEFIITFYLMFVISGVATDNRAIGE-LAGLAVGSTVLLNVIIAGPVSGASMNPGRS 234

  Fly   196 VGTAFATDIWASHWVYWVGPVLGGVAAALLYTQV-LEAKPVPKVNEASEKYRT 247
            :|.|.....:...|:|.|.|::|.|:.|.:|..| ...||:.::.::....:|
plant   235 LGPAMVYSCYRGLWIYIVSPIVGAVSGAWVYNMVRYTDKPLREITKSGSFLKT 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PripNP_001246266.1 MIP 12..226 CDD:444743 70/223 (31%)
NIP1;2NP_193626.1 PLN00184 1..293 CDD:177778 75/248 (30%)

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