Sequence 1: | NP_001029182.1 | Gene: | Tril / 362364 | RGDID: | 1310827 | Length: | 811 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
Alignment Length: | 820 | Identity: | 197/820 - (24%) |
---|---|---|---|
Similarity: | 288/820 - (35%) | Gaps: | 227/820 - (27%) |
- Green bases have known domain annotations that are detailed below.
Rat 8 RFWLVVCGCL-----------AFPPRAESVCPERCDC---QHPQHLLCTNRGLRAVPKTSSLPSP 58
Rat 59 QDVLTYSLGGNFITNITAFDFHR--LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQA 121
Rat 122 LAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHL 186
Rat 187 EANRIRFLGKNAFTQLGKLRFLNLSANEL----QPSLRHAATFVPLRSLSTLILSANSLQHLGPR 247
Rat 248 VFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNE 312
Rat 313 LSALHPATFGHQGRLRELSL-RDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGN 376
Rat 377 WHSQGRLLTVFVQCRHPPALRGKY-----LD-----YLDDQLLQ-NGSCVDPSPSPTAGSRQWPI 430
Rat 431 STAPGEGMTPPAGLAQELPLQPQPQPQQRGRLLPGVAWAGAAK-----ELVGNRSALRLNRRGPG 490
Rat 491 LQHQSPSAAAASGSAPQSL--DLHEKPERGRPTRANLPQTEP------TPTSEPASG------TP 541
Rat 542 SARDSWQRAAKQR--LASEQQGRAVQYDSGVGLPPLVSDPCDFNKFILCNLTVEAVSANSASVRW 604
Rat 605 AVREHRSPRPQGGARFRLLFDRFGQQPKFQRFVYLPERSDSA--TLHE--LRGDTPYLVCVEGVL 665
Rat 666 G-GRVCPVAPRDHCAGL----------------------VTLPEAGGRGGVDYQLLTLVLLAINA 707
Rat 708 LLVLLALAAWGSRWLRRKLRARRKGGAPV-----HVRHMY 742 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tril | NP_001029182.1 | LRR_RI | 22..313 | CDD:238064 | 82/299 (27%) |
leucine-rich repeat | 37..57 | CDD:275378 | 5/19 (26%) | ||
LRR 1 | 61..81 | 4/19 (21%) | |||
LRR_8 | 84..143 | CDD:290566 | 16/58 (28%) | ||
LRR 2 | 84..105 | 9/20 (45%) | |||
leucine-rich repeat | 85..108 | CDD:275380 | 10/22 (45%) | ||
LRR 3 | 108..129 | 5/20 (25%) | |||
leucine-rich repeat | 109..132 | CDD:275380 | 5/22 (23%) | ||
LRR 4 | 132..153 | 2/20 (10%) | |||
leucine-rich repeat | 133..156 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 156..215 | CDD:290566 | 16/58 (28%) | ||
LRR 5 | 156..177 | 4/20 (20%) | |||
leucine-rich repeat | 157..180 | CDD:275380 | 5/22 (23%) | ||
LRR 6 | 180..201 | 8/20 (40%) | |||
leucine-rich repeat | 181..204 | CDD:275380 | 8/22 (36%) | ||
LRR 7 | 204..223 | 6/22 (27%) | |||
leucine-rich repeat | 205..230 | CDD:275380 | 7/28 (25%) | ||
LRR_8 | 229..289 | CDD:290566 | 20/59 (34%) | ||
LRR 8 | 230..251 | 5/20 (25%) | |||
leucine-rich repeat | 231..254 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 254..275 | 8/20 (40%) | |||
leucine-rich repeat | 255..278 | CDD:275380 | 10/22 (45%) | ||
LRR 10 | 278..298 | 6/19 (32%) | |||
leucine-rich repeat | 279..302 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 302..359 | CDD:290566 | 19/57 (33%) | ||
LRR 11 | 302..323 | 8/20 (40%) | |||
leucine-rich repeat | 303..323 | CDD:275380 | 8/19 (42%) | ||
LRR 12 | 326..347 | 8/21 (38%) | |||
leucine-rich repeat | 327..340 | CDD:275378 | 7/13 (54%) | ||
leucine-rich repeat | 351..363 | CDD:275378 | 4/11 (36%) | ||
TPKR_C2 | 359..406 | CDD:301599 | 13/56 (23%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 414..460 | 6/45 (13%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 486..562 | 19/91 (21%) | |||
FN3 | 589..661 | CDD:214495 | 15/75 (20%) | ||
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 4/28 (14%) |
leucine-rich repeat | 98..121 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 120..180 | CDD:404697 | 19/83 (23%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 5/22 (23%) | ||
LRR | <161..>354 | CDD:227223 | 61/198 (31%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 7/28 (25%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 16/46 (35%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 337..397 | CDD:404697 | 17/69 (25%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 6/23 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.970 |