DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tril and Fili

DIOPT Version :9

Sequence 1:NP_001029182.1 Gene:Tril / 362364 RGDID:1310827 Length:811 Species:Rattus norvegicus
Sequence 2:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster


Alignment Length:820 Identity:197/820 - (24%)
Similarity:288/820 - (35%) Gaps:227/820 - (27%)


- Green bases have known domain annotations that are detailed below.


  Rat     8 RFWLVVCGCL-----------AFPPRAESVCPERCDC---QHPQHLLCTNRGLRAVPKTSSLPSP 58
            |.||  ||.:           ..||...:.||.:|.|   :.....||.:..|..||...:..:.
  Fly    14 RPWL--CGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETK 76

  Rat    59 QDVLTYSLGGNFITNITAFDFHR--LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQA 121
            ...||       :..|...:|..  ..:|..|||..|.|.:|..|.||..|.|..|.|..||   
  Fly    77 YINLT-------VNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNL--- 131

  Rat   122 LAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHL 186
                                 :..|.:.:|:||.:|:.|.|..|.:..:.....:.|.:|:.|.|
  Fly   132 ---------------------VSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDL 175

  Rat   187 EANRIRFLGKNAFTQLGKLRFLNLSANEL----QPSLRHAATFVPLRSLSTLILSANSLQHLGPR 247
            ..|.|..|..|.|..:..|..|....|.|    ..:|.|      |.:|.:|.:|.|.::.:...
  Fly   176 TNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWH------LHALKSLDMSLNLVEFVRND 234

  Rat   248 VFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNE 312
            .|:.|..|..||:.||.::.|...||.||.:|:.|.|..|.|..:|...|..|.:|..|:|.||.
  Fly   235 SFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNR 299

  Rat   313 LSALHPATFGHQGRLRELSL-RDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGN 376
            .|.|....|.:...||||.| |.:.|..:....|..:..|..|.|:.|....|..:|   .:.||
  Fly   300 FSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMR---LFQGN 361

  Rat   377 WHSQGRLLTVFVQCRHPPALRGKY-----LD-----YLDDQLLQ-NGSCVDPSPSPTAGSRQWPI 430
                ..:|.|::|..   :|:..|     :|     ||.|..|| |.|.:          ..|.:
  Fly   362 ----PNILEVYMQSN---SLQTLYSAQFPVDQLQKLYLGDNPLQCNCSLL----------WLWRL 409

  Rat   431 STAPGEGMTPPAGLAQELPLQPQPQPQQRGRLLPGVAWAGAAK-----ELVGNRSALRLNRRGPG 490
            .|...||:.|  |:..                ..|.|.|..||     ||....:|:.....|  
  Fly   410 VTGNFEGVDP--GMEH----------------AAGGAVAALAKEADDEELADEATAVASTDDG-- 454

  Rat   491 LQHQSPSAAAASGSAPQSL--DLHEKPERGRPTRANLPQTEP------TPTSEPASG------TP 541
                  .||.|:..|.|.:  .||              .|||      |.:|...||      ..
  Fly   455 ------VAALAAYIAEQHIVNALH--------------TTEPSAYELATSSSNRNSGILRMDRQQ 499

  Rat   542 SARDSWQRAAKQR--LASEQQGRAVQYDSGVGLPPLVSDPCDFNKFILCNLTVEAVSANSASVRW 604
            ...|.|:...:.|  |.:..:|.             ::.|......:...:|...|:....||.:
  Fly   500 IGCDIWRDKVRTRRKLLTMSEGE-------------ITCPAHIVTVVCAVITCLLVAMIGISVLY 551

  Rat   605 AVREHRSPRPQGGARFRLLFDRFGQQPKFQRFVYLPERSDSA--TLHE--LRGDTPYLVCVEGVL 665
            .:|..:..|       :||.:|.            |.|:..:  .:|:  |:|..|      |.|
  Fly   552 YLRFVKRRR-------KLLHERG------------PMRTSKSIINVHDRILQGHNP------GGL 591

  Rat   666 G-GRVCPVAPRDHCAGL----------------------VTLPEAGGRGGVDYQLLTLVLLAINA 707
            | |....:...:|..||                      :.|...||.|..:||..||..|  :.
  Fly   592 GLGMSMTLGGGNHVNGLGMTLNYPHHAQTLQAHHHYHQAMPLQSHGGNGNHEYQQTTLPQL--DK 654

  Rat   708 LLVLLALAAWGSRWLRRKLRARRKGGAPV-----HVRHMY 742
            |.:...|||   :.:..:.||.:....||     ...|:|
  Fly   655 LELERYLAA---QTIANEYRALKPWELPVKEADDEPEHLY 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrilNP_001029182.1 LRR_RI 22..313 CDD:238064 82/299 (27%)
leucine-rich repeat 37..57 CDD:275378 5/19 (26%)
LRR 1 61..81 4/19 (21%)
LRR_8 84..143 CDD:290566 16/58 (28%)
LRR 2 84..105 9/20 (45%)
leucine-rich repeat 85..108 CDD:275380 10/22 (45%)
LRR 3 108..129 5/20 (25%)
leucine-rich repeat 109..132 CDD:275380 5/22 (23%)
LRR 4 132..153 2/20 (10%)
leucine-rich repeat 133..156 CDD:275380 4/22 (18%)
LRR_8 156..215 CDD:290566 16/58 (28%)
LRR 5 156..177 4/20 (20%)
leucine-rich repeat 157..180 CDD:275380 5/22 (23%)
LRR 6 180..201 8/20 (40%)
leucine-rich repeat 181..204 CDD:275380 8/22 (36%)
LRR 7 204..223 6/22 (27%)
leucine-rich repeat 205..230 CDD:275380 7/28 (25%)
LRR_8 229..289 CDD:290566 20/59 (34%)
LRR 8 230..251 5/20 (25%)
leucine-rich repeat 231..254 CDD:275380 6/22 (27%)
LRR 9 254..275 8/20 (40%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
LRR 10 278..298 6/19 (32%)
leucine-rich repeat 279..302 CDD:275380 8/22 (36%)
LRR_8 302..359 CDD:290566 19/57 (33%)
LRR 11 302..323 8/20 (40%)
leucine-rich repeat 303..323 CDD:275380 8/19 (42%)
LRR 12 326..347 8/21 (38%)
leucine-rich repeat 327..340 CDD:275378 7/13 (54%)
leucine-rich repeat 351..363 CDD:275378 4/11 (36%)
TPKR_C2 359..406 CDD:301599 13/56 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 414..460 6/45 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 486..562 19/91 (21%)
FN3 589..661 CDD:214495 15/75 (20%)
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 4/28 (14%)
leucine-rich repeat 98..121 CDD:275380 10/22 (45%)
LRR_8 120..180 CDD:404697 19/83 (23%)
leucine-rich repeat 122..145 CDD:275380 9/46 (20%)
leucine-rich repeat 146..169 CDD:275380 5/22 (23%)
LRR <161..>354 CDD:227223 61/198 (31%)
leucine-rich repeat 170..193 CDD:275380 8/22 (36%)
leucine-rich repeat 194..217 CDD:275380 7/28 (25%)
leucine-rich repeat 218..265 CDD:275380 16/46 (35%)
leucine-rich repeat 266..289 CDD:275380 8/22 (36%)
leucine-rich repeat 290..313 CDD:275380 8/22 (36%)
leucine-rich repeat 314..338 CDD:275380 8/23 (35%)
LRR_8 337..397 CDD:404697 17/69 (25%)
leucine-rich repeat 339..360 CDD:275380 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.970

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