DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Drip and SIP1A

DIOPT Version :10

Sequence 1:NP_001260893.1 Gene:Drip / 36236 FlyBaseID:FBgn0015872 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_187059.1 Gene:SIP1A / 819564 AraportID:AT3G04090 Length:240 Species:Arabidopsis thaliana


Alignment Length:244 Identity:57/244 - (23%)
Similarity:96/244 - (39%) Gaps:54/244 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IWRMLLGELVGTFFLIFVGVGSTTSGSVPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIV 86
            :.:..:|:::.||..:.             ::.|||:..|.|... |........|.|.|..||.
plant     4 VLKSAIGDMLMTFSWVV-------------LSATFGIQTAAIISA-GDFQAITWAPLVILTSLIF 54

  Fly    87 GEISIL-------------KAAFYIIVQCVGAIAGAAVIKVALD------GVAGGDLGVSSFDP- 131
            ..:||.             .||||     |..:.|..:..:|:.      |.|||.|.:..|.| 
plant    55 VYVSIFTVIFGSASFNPTGSAAFY-----VAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPE 114

  Fly   132 -----------SLNCAQAVLIEALITFILVFVVKAVSDPGRQDIKGSAPLAVGLAIAAGHLCAIK 185
                       .::.....:.|.:::|.:.|.|..:...|.:.:.....| :.||..:..:...|
plant   115 KYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFL-LALATISFVVAGSK 178

  Fly   186 LSGASMNPARSFGPAVV---QGVWTYHWVYWVGPIAGGLLAGIIYRLIF 231
            .:|.:||||.:||.|.:   ...|.:.:|||:....|.|.|.:::|.||
plant   179 YTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIF 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DripNP_001260893.1 MIP 23..227 CDD:444743 54/237 (23%)
SIP1ANP_187059.1 MIP <123..224 CDD:444743 24/101 (24%)

Return to query results.
Submit another query.