DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7763 and Clec4a1

DIOPT Version :9

Sequence 1:NP_001356891.1 Gene:CG7763 / 36235 FlyBaseID:FBgn0040503 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001005890.1 Gene:Clec4a1 / 362430 RGDID:1359109 Length:243 Species:Rattus norvegicus


Alignment Length:150 Identity:42/150 - (28%)
Similarity:59/150 - (39%) Gaps:50/150 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LENQNTSQQLLTHGTAMGRKLE--------ENEI-------FQQLGSKYYYIEKEEKLNWHDALD 132
            ||.:||.|| |.|.     ||.        |:::       ::..||..|:..: :..:|.|:.:
  Rat    81 LEEKNTLQQ-LNHA-----KLHCIKNHSSVEDKVWSCCPKNWKPFGSHCYFTSR-DSASWSDSEE 138

  Fly   133 KCHKMGGHLASLQSQEELDRFNNQLNGLNRY--------------WIDVTNQFNESEFVSVTKGS 183
            ||...|.||..:.||||.|...:.||....|              |:|.| .||:          
  Rat   139 KCSHRGAHLLVIHSQEEQDFITDTLNPRAHYYVGLSDTEGHGKWQWVDQT-PFNQ---------- 192

  Fly   184 KANFLSWADGEPT-KDGECV 202
              |..||...||: ..|.||
  Rat   193 --NATSWHADEPSGNKGFCV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7763NP_001356891.1 CLECT 116..228 CDD:153057 28/101 (28%)
Clec4a1NP_001005890.1 CLECT_DC-SIGN_like 112..238 CDD:153060 30/112 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11467
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I5325
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.150

Return to query results.
Submit another query.