DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7763 and Clec4m

DIOPT Version :9

Sequence 1:NP_001356891.1 Gene:CG7763 / 36235 FlyBaseID:FBgn0040503 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:186 Identity:39/186 - (20%)
Similarity:75/186 - (40%) Gaps:43/186 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QLENQNTSQQLLTHGTAMGRKL-------------EENEIFQQLG-------------------- 113
            |::|::..:::....|.:..:|             ::.:|:|||.                    
  Rat   149 QVQNESMQEKISEQLTQLKAELLSKIPSLQVQDESKQEKIYQQLVQMKTELLRLCRLCPWDWTFL 213

  Fly   114 -SKYYYIEKEEKLNWHDALDKCHKMGGHLASLQSQEELDRFNNQLNGLNRYWIDVTNQFNESEFV 177
             ...|::.|.:: ||:||:..|.:....|..:.|.||..............|:.:::..||:.::
  Rat   214 LGNCYFLSKSQR-NWNDAVRACKEEKAQLVIINSDEEQTFLQLTSKAKGPTWMGLSDLKNEATWL 277

  Fly   178 SVTKGSKANFLS--WADGEPTKDGE--CVDIRTFNGKTTMNDNSCFANLYFICEKS 229
            .|...:.::...  |..|||...||  ||:   |.| ...||:.|....::|.:||
  Rat   278 WVDGSTLSSRFQKYWNRGEPNNIGEEDCVE---FAG-DGWNDSKCELKKFWIFKKS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7763NP_001356891.1 CLECT 116..228 CDD:153057 29/115 (25%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 29/126 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.