DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7763 and Pkd1

DIOPT Version :9

Sequence 1:NP_001356891.1 Gene:CG7763 / 36235 FlyBaseID:FBgn0040503 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_036016298.1 Gene:Pkd1 / 18763 MGIID:97603 Length:4316 Species:Mus musculus


Alignment Length:371 Identity:60/371 - (16%)
Similarity:95/371 - (25%) Gaps:179/371 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CLSSSYSAAC---------EGVESDSQCAAYCYGV---------LNPCIASMGNLQRRVEACEAA 59
            ||..:.|.|.         ||......|:|:|:..         .|.|:...|.......||.:.
Mouse   183 CLPDNSSGAVAAVPFYFAHEGPLETEACSAFCFSAGEGLAALSEQNQCLCGAGQASNSSAACSSW 247

  Fly    60 VAIARIALN----------------------------------DRRLD----------NFG---- 76
            .:...::||                                  |..:.          |||    
Mouse   248 CSSISLSLNSACGGPTLLQHTFPASPGATLVGPHGPLASGQPADFHITSSLPISSTRWNFGDGSP 312

  Fly    77 ---------------------------------TSTNLQLENQNTSQQLL----THGTAM----- 99
                                             ..|.:|:|...|..:|:    .|....     
Mouse   313 EVDMASPAATHFYVLPGSYHMTVVLALGAGSALLETEVQVEATPTVLELVCPSFVHSNESLELGI 377

  Fly   100 ----GRKLE----------------------ENEIFQQLGSKYYYIEKEEKLNWHDALDKCHKMG 138
                |..||                      :.|||.  |:.:.|....||..|..|.::|....
Mouse   378 RHRGGSALEVTYSILALDKEPAQVVHPLCPLDTEIFP--GNGHCYRLVAEKAPWLQAQEQCRTWA 440

  Fly   139 GHLASLQSQEELDRFNNQLNGLNR---YWIDVTNQFNESEFVSVTKG--------SKANFLSWAD 192
            |...::.....:..|  .::.:.|   .||..::       |..|:|        |..:..:|..
Mouse   441 GAALAMVDSPAIQHF--LVSKVTRSLDVWIGFSS-------VEGTEGLDPRGEAFSLESCQNWLP 496

  Fly   193 GEP---TKD--------GECVDIRTFNGKTTMNDNSCFANLYFICE 227
            |||   |.:        |:|            |.:.|.|...::||
Mouse   497 GEPHPATAEHCVRLGPAGQC------------NTDLCSAPHSYVCE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7763NP_001356891.1 CLECT 116..228 CDD:153057 27/134 (20%)
Pkd1XP_036016298.1 LRRNT 32..71 CDD:214470
LRR_8 61..127 CDD:404697
leucine-rich repeat 70..92 CDD:275378
leucine-rich repeat 93..116 CDD:275378
PCC 97..2731 CDD:188093 60/371 (16%)
leucine-rich repeat 117..129 CDD:275378
GPS 3011..3060 CDD:413374
PLAT_polycystin 3118..3237 CDD:238850
PKD_channel 3726..4126 CDD:400395
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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