DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-3 and SET5

DIOPT Version :9

Sequence 1:NP_725048.1 Gene:Smyd4-3 / 36234 FlyBaseID:FBgn0033633 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_012077.1 Gene:SET5 / 856614 SGDID:S000001250 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:457 Identity:90/457 - (19%)
Similarity:151/457 - (33%) Gaps:158/457 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 DDSTL------ASDKRAKLNLDAMTMIKMLQNDPR---TAKQEAKQQKQKI----ALDQAKPVKL 232
            :|:|:      .:::.....|.|....|:| |:..   |..:.....|.||    |||  ...|:
Yeast    53 EDATIQHLYDRITERNQSWKLSASRFRKIL-NEHHLYDTDLETVSLYKDKIHFPKALD--SDAKV 114

  Fly   233 ENEFVSPLVRIDSNRQEGRFARASADVKPGEELLVE-RPFVSV--LLEKFAKTHCENCFMRTVVP 294
            |.:|      ||.....|.||:  .|...|:.:|.| :|.|.:  |.:.|..::.:         
Yeast   115 EVKF------IDDEHGRGLFAK--RDFSKGQIILKENKPIVYIPPLDKLFLISNGK--------- 162

  Fly   295 VACPRCADVLY---------------------CSEQCREEASK----KYHKYECGIVPII----W 330
             ||.||...||                     |||:|::..:.    .||.:....:.|:    |
Yeast   163 -ACARCGKALYDLTQHKIMVHYLDCEVCKAIWCSEKCKKAHASLHELLYHSWRSNRIDILHAGNW 226

  Fly   331 RSGASINNHIALRIIASKPLDYFLKLKPTIDEELTPEQLISLPKDDFRRVAQLERHQ-------- 387
            :...:...........|..|.|...|..|..|          .|:.::::|.:.:.:        
Yeast   227 KRFVNYCEKYCFTAAFSVGLIYGSMLLDTTGE----------VKEQWQKLASISQRERIKLRDAS 281

  Fly   388 ---------------GERQPSNFFQHVLMARFLTNCLRAGGYFGSEPKPDEVSI-------ICSL 430
                           .|.:..|                 |...|.|...|:.::       .|..
Yeast   282 GIGSTFSLLNGTTVHTEEESDN-----------------GTKKGVEKNIDDETVWEKCYELFCGA 329

  Fly   431 VLRSLQFIQFNTHEVAELHKFSSSGREKSIFIG--------GAIYPTLALFNHSCDPGVVRYFRG 487
            ..::.:.|.|        .||.:       .||        |.:|..::..||.|:|..  |...
Yeast   330 FPKASEEIDF--------EKFLT-------MIGTFNINQYNGQVYHWISFINHDCEPNA--YIEQ 377

  Fly   488 TTIH----INSVRPIEAGLPINENY-GPMYTQDERSERQARLKDLYW-FECSCDACIDNWPKFDD 546
            ...|    :::.:||:.|..|...| .|::....| .|:.|:.   | |.|.||.|.:....|:.
Yeast   378 VEEHEELRLHARKPIKKGEQIRITYVNPLHGVRLR-RRELRVN---WGFLCQCDRCQNELSTFER 438

  Fly   547 LP 548
            :|
Yeast   439 VP 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-3NP_725048.1 TPR_11 74..143 CDD:290150
TPR repeat 74..103 CDD:276809
TPR repeat 108..142 CDD:276809
TPR repeat 150..177 CDD:276809
zf-MYND 284..323 CDD:280009 12/63 (19%)
SET5NP_012077.1 SET 41..526 CDD:225491 90/457 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 57 1.000 Domainoid score I2650
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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