DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-3 and SMYD2

DIOPT Version :9

Sequence 1:NP_725048.1 Gene:Smyd4-3 / 36234 FlyBaseID:FBgn0033633 Length:660 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:467 Identity:109/467 - (23%)
Similarity:186/467 - (39%) Gaps:131/467 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 FVSPLVRIDSNRQEGRFARASADVKPGEELLVERPFVSVLLEKFAKTHCENCFMRTVVPVACPRC 300
            |.||        .:||..||....:.|:.|.....:..||.......|||.||.|......|.||
Human    12 FCSP--------GKGRGLRALQPFQVGDLLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGRC 68

  Fly   301 ADVLYCSEQCREEASKKYHKYECGIVPII-----WRSGASINNHIALRIIASKPLDYFLKLKPTI 360
            ....||:.:|::| ....||.||.  |::     |....::  .:..||:|          |..|
Human    69 KQAFYCNVECQKE-DWPMHKLECS--PMVVFGENWNPSETV--RLTARILA----------KQKI 118

  Fly   361 DEELTP-EQLISLPKDDFRRVAQLERH--QGERQPSNFFQHVLMA--RFLTNCLRAGGYFGSEPK 420
            ..|.|| |:|::        |.:.|.|  :.:.:..:..|..:.|  .|.:..|   |:      
Human   119 HPERTPSEKLLA--------VKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHL---GF------ 166

  Fly   421 PDEVSIICSLVLRSLQFIQFNTHEVAELHKFSSSGREKSIFIGGAIYPTLALFNHSCDPGVVRYF 485
            ||..|::       :.|.|.|      .:.|:....|.| .:|.||:|.:||.||||.|.|:..:
Human   167 PDNDSLV-------VLFAQVN------CNGFTIEDEELS-HLGSAIFPDVALMNHSCCPNVIVTY 217

  Fly   486 RGTTIHINSVRPIEAGLPINENY-GPMYTQDERSERQARLKDLYWFECSCDAC------------ 537
            :||...:.:|:.|:.|..:..:| ..:|..::|::   ||:|.|:|.|.|..|            
Human   218 KGTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRND---RLRDSYFFTCECQECTTKDKDKAKVEI 279

  Fly   538 --IDNWPKFDDLPRDVIRF---------RCDAPNNCSAVIEVPPSCNDFMVKCVTCGEITNI--- 588
              :.:.||.:.: ||::|:         |.....:.|.::|:   |.....|..:..|.:|:   
Human   280 RKLSDPPKAEAI-RDMVRYARNVIEEFRRAKHYKSPSELLEI---CELSQEKMSSVFEDSNVYML 340

  Fly   589 ---LKGLKV---MQDTEMMTRTAKRLYE--TGEYPKALAKFVDLIRIMYEVLAPPFPDFCESQQH 645
               .:.:.|   |||.|...:..:::.:  :..||            :|.:             :
Human   341 HMMYQAMGVCLYMQDWEGALQYGQKIIKPYSKHYP------------LYSL-------------N 380

  Fly   646 LKDCFLNLGNVY 657
            :...:|.||.:|
Human   381 VASMWLKLGRLY 392

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-3NP_725048.1 TPR_11 74..143 CDD:290150
TPR repeat 74..103 CDD:276809
TPR repeat 108..142 CDD:276809
TPR repeat 150..177 CDD:276809
zf-MYND 284..323 CDD:280009 14/38 (37%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 85/313 (27%)
S-adenosyl-L-methionine binding 17..19 0/1 (0%)
zf-MYND 52..90 CDD:396356 14/38 (37%)
Peptide substrate binding 183..185 0/1 (0%)